| Entry |
|
| Name |
[histone-H3]-lysine-36 demethylase;
JHDM1A;
JmjC domain-containing histone demethylase 1A;
H3-K36-specific demethylase;
histone-lysine (H3-K36) demethylase;
histone demethylase;
protein-6-N,6-N-dimethyl-L-lysine,2-oxoglutarate:oxygen oxidoreductase
|
| Class |
Oxidoreductases;
Acting on paired donors, with O2 as oxidant and incorporation or reduction of oxygen. The oxygen incorporated need not be derived from O2;
With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
 |
| Sysname |
protein-N6,N6-dimethyl-L-lysine,2-oxoglutarate:oxygen oxidoreductase
|
| Reaction(IUBMB) |
protein N6,N6-dimethyl-L-lysine + 2 2-oxoglutarate + 2 O2 = protein L-lysine + 2 succinate + 2 formaldehyde + 2 CO2 (overall reaction) [RN: R10056];
(1a) protein N6,N6-dimethyl-L-lysine + 2-oxoglutarate + O2 = protein N6-methyl-L-lysine + succinate + formaldehyde + CO2 [RN: R09510];
(1b) protein N6-methyl-L-lysine + 2-oxoglutarate + O2 = protein L-lysine + succinate + formaldehyde + CO2 [RN: R09511]
|
| Reaction(KEGG) |
|
| Substrate |
protein N6,N6-dimethyl-L-lysine [CPD: C05545];
2-oxoglutarate [CPD: C00026];
O2 [CPD: C00007];
protein N6-methyl-L-lysine [CPD: C05544]
|
| Product |
protein L-lysine;
succinate [CPD: C00042];
formaldehyde [CPD: C00067];
CO2 [CPD: C00011];
protein N6-methyl-L-lysine [CPD: C05544]
|
| Comment |
Requires iron(II). Of the seven potential methylation sites in histones H3 (K4, K9, K27, K36, K79) and H4 (K20, R3) from HeLa cells, the enzyme is specific for Lys-36. Lysine residues exist in three methylation states (mono-, di- and trimethylated). The enzyme preferentially demethylates the dimethyl form of Lys-36 (K36me2), which is its natural substrate, to form the monomethyl and unmethylated forms of Lys-36. It can also demethylate the monomethyl- but not the trimethyl form of Lys-36.
|
| Orthology |
| F-box and leucine-rich repeat protein 10/11 | | bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 |
|
| Genes |
HSA: | | PTR: | | PPS: | | GGO: | | PON: | | MCC: | | MMU: | | RNO: | | CFA: | | AML: | | FCA: | | BTA: | | SSC: | | ECB: | | MDO: | | SHR: | | OAA: | | GGA: | | MGP: | | TGU: | | ACS: | | XLA: | | XTR: | | DRE: | | TRU: | | OLA: | | BFO: | | CIN: | | SPU: | | DME: | | DPO: | | DAN: | | DER: | | DPE: | | DSE: | | DSI: | | DWI: | | DYA: | | DGR: | | DMO: | | DVI: | | AGA: | | AAG: | | CQU: | | AME: | | NVI: | | TCA: | | API: | | PHU: | | ISC: | | CEL: | | CBR: | | BMY: | | SMM: | | NVE: | | HMG: | | TAD: | | AQU: | | PPP: | | OLU: | | OTA: | | CME: | | SCE: | | AGO: | | ERC: | | KLA: | | LTH: | | PPA: | | VPO: | | ZRO: | | CGR: | | TPF: | | TDL: | | DHA: | | PIC: | | PGU: | | LEL: | | CAL: | | CTP: | | CDU: | | COT: | | YLI: | | CLU: | | ANI: | | NFI: | | AFM: | | AOR: | | ANG: | | AFV: | | ACT: | | PCS: | | CIM: | | CPW: | | PBL: | | URE: | | ABE: | | TVE: | | AJE: | | PNO: | | PTE: | | ZTR: | | TML: | | SPO: | | CNE: | | CNB: | | CGI: | | LBC: | | CCI: | | SCM: | | UMA: | | MGL: | | PGR: | | MBR: | | NGR: | | DDI: | | DPP: | | TCR: | | LMA: | | LIF: | | LDO: | | LMI: | | LBZ: | | PTI: | | TPS: | | PIF: | | » show all
 |
| Reference |
|
| Authors |
Tsukada Y, Fang J, Erdjument-Bromage H, Warren ME, Borchers CH, Tempst P, Zhang Y. |
| Title |
Histone demethylation by a family of JmjC domain-containing proteins. |
| Journal |
Nature. 439 (2006) 811-6. |
| Organism |
Homo sapiens [GN: hsa], Saccharomyces cerevisiae [GN: sce] |
| Other DBs |
ExplorEnz - The Enzyme Database: IUBMB Enzyme Nomenclature: ExPASy - ENZYME nomenclature database: BRENDA, the Enzyme Database: |