KEGG   Paracidovorax avenae: Acav_3250
Entry
Acav_3250         CDS       T01445                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
aaa  Paracidovorax avenae
Pathway
aaa03420  Nucleotide excision repair
aaa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Acav_3250
   03430 Mismatch repair
    Acav_3250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aaa03400]
    Acav_3250
Enzymes [BR:aaa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Acav_3250
DNA repair and recombination proteins [BR:aaa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Acav_3250
   MMR (mismatch excision repair)
    Other MMR factors
     Acav_3250
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor Viral_helicase1 AAA_12 AAA_30
Other DBs
NCBI-ProteinID: ADX47152
UniProt: F0Q922
Position
complement(3700608..3703064)
AA seq 818 aa
MLPHDLFSGAPAPFGAAEPGLAAAPAAASPLLQNLNDEQLAAVTLPAGHALILAGAGSGK
TRVLTTRIAWLLQNGYVSPGGILAVTFTNKAAKEMTARLSAMLPVNVRGMWIGTFHGLCN
RLLRAHHKSAGLPATFQILDTQDQLSAVKRLCKQFNIDEERFPPKQMAYFISGCKEEGLR
PGDVDARDADGRKKVELYQLYEEQCQREGVVDFGELMLRSYELLRDNDPIRAHYQRRFQH
ILVDEFQDTNKLQYAWLKQIAGDMVDGRLVTHGSVLAVGDDDQSIYAFRGARVGNMQDFV
REFDVRHQIKLEQNYRSYSNILDSANALISHNSRRLGKNLRTTQGPGEPVRVYEAPTDLA
EAQWMVDEIRQLARNDGFERREIAVLYRSNAQSRVIESALFNAAVPYRVYGGLRFFERAE
IKHALAYLRLLENPHDDTSFMRVVNFPPRGIGARTVEVLQDAARQAGCSLHDAVSAVPGK
AGANLGAFVAMVDVMREQTQGQTLRGIIGQMLESSGLVEHYRAEKEGADRLENLDELINA
AESFVTQEGFGRDAVALPVDEHGASLRQSPASQGIDPSLPVVDEPLPVGVDADTGETLSP
LAAFLTHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDAVFIGGMEEGLFPHENSMSDRD
GLEEERRLMYVAITRARKRLYLSHSQTRLLHGQTRYNIKSRFFDELPEAALKWITPKQQG
FGSFAPQSGGRGGSAGTPWGGFGSGARSETFASPPVPAQKAPPAYGLRVGLAVFHTKFGE
GKVLSLEGSGDDARAQVNFPRHGTKWLALSVAKLTVVE
NT seq 2457 nt   +upstreamnt  +downstreamnt
atgctcccacacgacctgttttccggcgcgccagcgcctttcggtgctgccgagccgggc
ctcgcggccgcgccggccgccgcgtcgcccctgctgcagaacctgaacgacgagcaactc
gccgccgtcacgctgcctgcgggccacgccctgatcctggccggtgcgggctccggcaag
acccgcgtgctcaccacgcgcatcgcctggctgctgcagaacggctacgtctcgcccggc
ggcatcctggccgtcaccttcaccaacaaggctgcgaaggaaatgacggcgcgcctctcg
gccatgctgccggtgaacgtgcgcggcatgtggatcggcaccttccacggcctgtgcaac
cggctgctgcgcgcccaccacaagtcggcagggctgcccgccaccttccagatcctggac
acgcaggaccagctctcggccgtgaagcggctgtgcaagcagttcaacatcgacgaggag
cgctttcccccgaagcagatggcctacttcatcagcggctgcaaggaagagggactgcgg
cccggcgacgtggatgcgcgcgatgcggacgggcgcaagaaggtggagctctaccagctc
tacgaagagcagtgccagcgcgagggcgtggtggatttcggcgaactgatgctgcgcagc
tacgaactgctgcgcgacaacgacccgatccgcgcgcattaccagcggcgcttccagcac
atcctggtggacgagttccaggacacgaacaagctgcaatacgcctggctcaagcagatc
gcgggcgacatggtggacggccgcctcgtcacgcacggcagcgtgctggccgtgggcgac
gacgaccagagcatctacgccttccgcggcgcgcgcgtgggcaacatgcaggatttcgtg
cgcgagttcgacgtgcgccaccagatcaagctggagcagaactaccgcagctacagcaac
atcctggattcggccaacgccctcatcagccacaacagccgccgcctgggcaagaacctg
cgcaccacgcaggggcccggcgagcccgtgcgcgtctatgaagcgcccaccgacctggcg
gaggcgcaatggatggtggacgagatccgccagctcgcgcgcaacgacggcttcgagcgg
cgcgagatcgcggtgctctaccgcagcaacgcgcagagccgggtgatcgagtcggcgctc
ttcaatgccgcggtgccctaccgcgtgtacggcggcctgcgcttcttcgagcgcgcggaa
atcaagcatgcgctggcctacctgcgcctgctggagaacccgcacgacgacacgagcttc
atgcgggtggtgaacttcccgccgcgcggcatcggggcgcgcacggtcgaggtgctgcag
gacgcggcgcggcaggccggctgttcgctgcacgatgcggtgagcgccgtgcctggcaag
gcgggcgccaacctgggcgcgttcgtcgccatggtggacgtgatgcgcgagcagacgcag
ggccagacgctgcgcggcatcatcggccagatgctcgaatcgagcgggctggtggagcac
taccgcgccgagaaggaaggcgcggaccggctggagaacctggacgaactgatcaacgcg
gccgagagcttcgtcacgcaggagggcttcggccgcgacgccgtcgcgctgccggtggac
gagcacggcgccagcctgcgccagagccctgcgagccagggcatcgacccctccctgccg
gtggtggacgagcccctgccggttggcgtggacgccgataccggcgagacgctgtcgccc
ctggccgccttccttacgcacgccgcgctggaggccggcgacaaccaggcccaggccggg
caggatgccgtgcagctcatgaccgtgcacgcgtccaaggggctggagttcgatgccgtg
ttcatcggcggcatggaagagggcctgttcccgcacgagaactccatgagcgaccgggac
ggcctcgaggaagagcgccgcctgatgtacgtggcgatcacgcgcgcccgcaagcgcctt
tatctcagccactcgcagacgcgcctgctgcacgggcagacgcgctacaacatcaagagc
cggttcttcgacgagctgcccgaggcggcgctgaaatggatcacgcccaagcagcagggc
ttcggcagcttcgcgccgcagtccggcggacggggcgggagtgcggggacgccatggggc
ggcttcgggtcgggggccaggtcggagaccttcgcgagcccgcccgtgccggcgcagaag
gcgccgccggcctatggcctgcgcgtggggctcgcggtgttccacaccaagttcggcgaa
ggcaaggtgctgtcgctcgaaggctcgggcgacgatgcgcgtgcgcaggtgaacttcccg
cggcatggcaccaagtggctggcgctgtcggtggccaagctcacggtggtggagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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