KEGG   Acidipropionibacterium acidipropionici CGMCC 1.2230: ASQ49_12055
Entry
ASQ49_12055       CDS       T04523                                 
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
aaci  Acidipropionibacterium acidipropionici CGMCC 1.2230
Pathway
aaci03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aaci00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ASQ49_12055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aaci03021]
    ASQ49_12055
   03019 Messenger RNA biogenesis [BR:aaci03019]
    ASQ49_12055
Transcription machinery [BR:aaci03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     ASQ49_12055
Messenger RNA biogenesis [BR:aaci03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ASQ49_12055
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N Spore_III_AA NACHT AAA_22 AAA_25 ResIII
Other DBs
NCBI-ProteinID: ALN15868
UniProt: A0A806VBR0
Position
2686728..2688755
AA seq 675 aa
MYVTSSTQNGGSTGDLSSKLLPELRSIGTQMGIKGARTMRKADLVSAIKAGGFVQASARS
GEPRSRRAPRAAAATDTATPPKAENSTAPKADNNAAPKAESRTAPTADNNAAPASRNQEE
LPTGSGQAETSRPSRARGTDQDRPRRRNNAQPRSEDAAQAGAGEDRSESQHGGPNHQDST
HQESNRNRRRRNQPRHNFDEAVAESPSAEVNDEVGARLEALSQQAGHQGGGESRRSEGRT
ESRSEPRHEDLGGTGSDDDFGNGRRSRRRRQRDRQNRRNKRGPEQRYSGNDSDPNVREDD
VLVPCSGILDIRDQYAFVRTSGYLPGPNDAYVSMNMVRKHGLRRGDVVTGALRAKREGER
REKFAPLVRLDTVNGVDPEQMRSRAEFSKLTPLYPQERLRLETDAKNMTGRIIDLVSPIG
KGQRGLIVSPPKAGKTMIMQSIANSITRNNPEVHLMVVLVDERPEEVTDFERTVSGEVIA
STFDRPADDHTQLSELAIERAKRLVELGHDVVVLLDGITRLGRAYNLAAPASGRILSGGV
DSAALYPPKKFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNSELRLRREF
ANKRLFPAIDVDASGTRREELLLSREETAIMWKLRRVLSGLDGSQALEMMLSKLRKTQTN
LEFLYAISKTTPSAD
NT seq 2028 nt   +upstreamnt  +downstreamnt
atttacgtgaccagttccacccagaacggcggatccaccggggatctgtcgagcaagctt
ctgcccgaactgcggtccatcgggacccagatgggcatcaagggtgccaggacgatgagg
aaggccgatctcgtctcggccatcaaggccggtggcttcgtgcaggcctccgcccgctcc
ggcgagccgcgctccaggcgggcgccgagggccgctgccgccacagacaccgccaccccg
ccgaaggccgagaacagcaccgcgccgaaggccgacaacaacgccgcgccgaaggccgag
agcaggaccgcgccgacggccgacaacaacgccgcaccggcttcgaggaaccaggaggag
ctgccgaccggatcgggccaggccgagacctcgcgcccctcccgggcccgcgggacggac
caggaccggccgcgccgtcgcaacaatgctcagccgcgttccgaggacgccgcgcaggcc
ggagccggcgaggaccgctccgagagccagcacggtgggcccaaccaccaggactcgacc
catcaggagtcgaaccgcaaccggcgccgtcgcaaccagccgcgtcacaatttcgacgag
gccgtggccgagtccccctcggccgaggtgaacgacgaggtcggcgcccgcctggaggcg
ctctcccagcaggccggccaccagggcgggggagagagccgacgctccgagggccgcacc
gagtcgcgcagcgagccccgtcatgaggatctcggcggcacgggttccgatgacgacttc
ggcaatggtcgcaggtcccgcaggcgccgtcagcgcgaccgccagaaccgccgcaacaag
cgcggtccggagcagcgctactccgggaacgactcggaccccaatgtccgcgaggacgac
gtcctggtgccctgctcgggcatcctcgacatccgcgaccagtacgccttcgtgcgcacc
agcggatacctgcccggccccaacgacgcctacgtctcgatgaacatggtccgcaagcac
gggctgcgcaggggagacgtggtcaccggtgcgctgcgtgccaagcgcgagggggagagg
cgtgagaagttcgcccccctggtgcgcctggacacggtcaacggcgtcgatcccgagcag
atgcgcagtcgcgccgagttctccaagctgaccccgctgtacccccaggagaggctgcgt
ctggagaccgacgcgaagaacatgaccggccggatcatcgacctggtcagtccgatcggc
aagggccagcgcggcctcatcgtctctccgcccaaggcgggcaagacgatgatcatgcag
tcgatcgccaactcgatcacccggaacaatccggaggtccatctcatggtggtcctggtc
gacgagcgtcccgaggaggtcaccgacttcgagcggaccgtctccggggaggtcatcgcc
tccaccttcgaccgtcccgccgacgaccacacccagctctccgagctggccatcgagagg
gccaagaggctcgtcgagctcggtcacgacgtggtggtcctgctggacggcatcacccgt
cttgggcgcgcctacaacctggcggcaccggcctcgggacggatcctgtcgggcggcgtg
gactccgcggccctctacccgccgaagaagttcttcggcgccgcccgcaacatcgagaac
ggcggttcgctgaccatcctggccaccgccctggtggagaccgggtcgaagatggacgag
gtgatcttcgaggagttcaaggggacgggcaactcggagctgcggctgcgccgcgagttc
gccaacaagcgcctcttcccggccatcgacgtggacgcctccggcacccgccgcgaggag
ctgctgctgtcgcgcgaggagaccgcgatcatgtggaagctgcgccgggtgctctcgggg
ctcgacggctcccaggcccttgagatgatgctgtccaagctgcgcaagacccagacgaat
ctggagttcctctacgcgatctcgaagaccaccccctcggccgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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