KEGG   Aggregatibacter actinomycetemcomitans NUM4039: AANUM_0481
Entry
AANUM_0481        CDS       T04531                                 
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
aacn  Aggregatibacter actinomycetemcomitans NUM4039
Brite
KEGG Orthology (KO) [BR:aacn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aacn03009]
    AANUM_0481
Enzymes [BR:aacn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AANUM_0481
Ribosome biogenesis [BR:aacn03009]
 Prokaryotic type
  rRNA helicases
   AANUM_0481
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UvrA_inter WSD
Other DBs
NCBI-ProteinID: BAS47712
Position
complement(458375..459706)
AA seq 443 aa
MTNLIQFADFDLAPELLNALQKKGYQRPTAIQQETIPAAMGGGDVLGSAPTGTGKTAAFL
LPAIQHLLDYPRRKPGAPRVLVLTPTRELAMQVAEQAKELACFTKLSIATITGGVAYQNH
GEIFNKNQDIVVATPGRLLQYIKEENFDCRTVEILIFDEADRMLQMGFGQDAEKIAAETR
WRKQTLLFSATLEGDLLEDFAARTLNEPVKIEAEPSRRERKKIQQWYYHADSHEHKFKLL
ARFIEQEQVSKGIVFVRRREEVRELAENLRKRGIRSAYLEGEMAQTQRNNAIDKLKNGVV
TVLVSTDVSARGIDIDDVSHIMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYRL
LGKIKRYTGELLKARVIEGLEPRTKAPKDGEIKTVSKKQKAKKLEKREARKKADKKVKQR
HQDRKNIGKRRKPSASTTAAAVK
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgacaaacctcatccaatttgcagattttgatctcgcgcccgaattactcaacgccctt
cagaaaaaaggttaccaacgccccactgcgatccagcaggaaaccattccggcggcgatg
ggaggcggtgacgtattgggttccgcgcccaccggcaccggtaaaacggcggcgtttctg
ttgccggcgattcagcatttgctggattacccacgtcgtaaaccgggtgcgccgcgcgtg
ttggtgttaacgccgacccgtgaacttgccatgcaggtagcggaacaggcgaaggagctt
gcctgcttcaccaaactcagtatcgcgactattacgggcggtgtggcgtatcaaaatcac
ggggaaattttcaataaaaatcaagatattgtagttgccacgccgggacggttgttgcaa
tacattaaagaagaaaattttgattgccgcacggtggagattcttattttcgatgaagcg
gacagaatgttgcaaatggggttcgggcaggatgcggaaaaaattgcggcggaaacccgc
tggcgcaagcaaaccttgttgttctccgcaactcttgaaggcgatttgctggaggatttt
gccgcacgtactttaaacgaaccggtgaaaattgaggcggaaccgagccgccgtgaacgc
aagaaaattcagcaatggtattatcacgccgacagccatgagcataaattcaaattgctg
gcacgcttcattgagcaggaacaggtgagcaaaggtattgtgttcgtgcgtcgccgcgaa
gaagtgcgcgaactggcggaaaatttgcgtaagcgtggtattcgcagcgcctatctggaa
ggcgaaatggcacaaacccagcgcaataatgccatcgacaagctgaaaaacggcgtggta
accgtgttggtttccacggatgtctccgcacgtggcattgatattgatgatgtcagccac
attatgaatttcgatttgccgtacagcgccgacacgtatttgcaccgcatcggtcgcacc
gcacgcgccggcaaaaaaggcacggcggtatcttttgtggaagctcacgattaccgcctg
ctcggtaaaattaaacgttataccggcgaactcttaaaagctcgtgtcattgaaggcttg
gaaccacgcaccaaagcaccgaaagacggcgaaatcaagaccgtcagcaagaaacaaaaa
gcgaagaaactcgaaaaacgtgaagcgcggaaaaaagcggataagaaagtcaaacagcgc
catcaagatcgtaaaaacattggtaagcgccgcaaaccgagcgcttcaaccacggcagca
gccgttaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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