KEGG   Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_1033
Entry
TC41_1033         CDS       T01821                                 
Symbol
nfo
Name
(GenBank) apurinic endonuclease Apn1
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
aad  Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:aad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TC41_1033 (nfo)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aad03400]
    TC41_1033 (nfo)
Enzymes [BR:aad01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     TC41_1033 (nfo)
DNA repair and recombination proteins [BR:aad03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     TC41_1033 (nfo)
SSDB
Motif
Pfam: AP_endonuc_2 PRMT5_TIM
Other DBs
NCBI-ProteinID: AEJ42985
UniProt: F8IG14
Position
complement(1040891..1041739)
AA seq 282 aa
MREEDRFEGILLGANVSVAGTGLLAAVEETISYGANTFMIYTRSNRGGKARPIETFHRDE
GLALMREHGIHDPVVHLSYLVNLASPKPETRQYGMDVLREEIERVEYLGFRYIVMHPGSH
VGEGESFAIRQIADALNEILTGDESLWLCLETMAGDGSKVGNSLEEIADIISRVKHEDRL
GVCIDTCHNYSYGYDVVNDFDGFLAEFDRVLGLNRLKVVHINDSKHPFGSRKDRHANVGE
GTLGLEALKRIVHHPALKGIPQILETPEGKYKEEIDLLLDRA
NT seq 849 nt   +upstreamnt  +downstreamnt
atgcgcgaagaagatcgcttcgagggcatcctgctcggcgcaaacgtctccgtcgccggg
acgggacttttggcggccgtggaggagaccatctcgtacggcgccaacacgtttatgatt
tacacccgcagcaatcggggcggcaaggcgcgtcccatcgagacgtttcaccgggacgag
ggcctcgccttgatgcgggaacacggcattcacgatcccgtcgtgcacctgtcgtacctc
gtcaatctggcgagcccgaagccggagacgcgacagtacggcatggatgtattgcgcgag
gagattgaacgggtggagtatttgggattccgctacatcgtcatgcaccccggctcccac
gtcggcgagggagaatcgtttgccatccggcaaattgccgacgcgctgaacgagatcctc
acgggagacgagtcgctgtggctatgcctggagaccatggcgggggacggatccaaagtc
ggcaacagccttgaggaaatcgccgacatcatcagccgcgtcaagcacgaggaccgcctc
ggcgtctgcatcgacacgtgccacaattacagctacggctacgacgtcgtgaacgacttc
gacggcttcttggccgagttcgatcgcgtcctcgggctgaatcgcctgaaggtggtccac
atcaacgactcgaaacatccgttcggctcgcgcaaggatcggcacgccaacgtgggcgaa
gggacgcttggcctggaggcgctcaagcgcattgtccaccatccggcgctcaagggcatc
ccccagatcctcgagacgccggaaggcaagtacaaggaggaaatcgacctgctcctcgac
cgcgcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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