KEGG   Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_1545Help
Entry
TC41_1545         CDS       T01821                                 
Gene name
lig
Definition
ATP dependent DNA ligase
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
aad  Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:aad03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:aad03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:aad03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:aad03450]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1519166..1520110
Genome map
AA seq 314 aa AA seqDB search
MPFFRPFEPLSSAVVPTGGAWIAQVKWDGVRAVAEVSDAGVQIWNRHGRLRTDRYPEIAS
ALRPFRGCAFDGEVVALAQGRPDFYRVLRRERAVTSREIERLVREIPVWYAVFDVVQMSG
KWVGDWPLAKRLGWMVEHVSGVEHVLATESEVDTEALFAATKQLGLEGIVCKRVDSTYAP
GHRDGRWVKVKHARNAIAAVGGVMYRDGAPNALMLGLFDDQARLIHVGNAGAGRLPHRAW
ELLVKRVLSHEITLPPFANAPKVVRPCRFAHPVVAVKVRFAEWTPKGTMRHPVLLAELDI
PATPAACSFAQADP
NT seq 945 nt NT seq  +upstreamnt  +downstreamnt
atgccgttctttcgaccgttcgaacccctatcgagcgccgtcgtgcccacgggaggcgcg
tggatagcacaggtcaagtgggatggggtgcgcgccgtggccgaggtgtcggacgccggc
gtgcaaatctggaaccgccatggacggcttcgaacggaccggtatccggagattgcatcc
gcgctgcggccctttcgggggtgtgctttcgacggcgaagtggtggcgctcgcccaggga
aggcccgacttttaccgggttcttcgcagggagcgggccgtcacgtcgcgcgagatcgag
cgactcgtgcgcgagatacccgtgtggtacgccgtcttcgacgtcgtgcagatgagcggg
aaatgggttggggattggccattggccaaacgcctcggctggatggtcgagcatgtttca
ggtgtggagcacgtgctggcgaccgaaagcgaagtggacaccgaggcgctcttcgccgcc
accaagcaactggggctcgaaggcatcgtgtgcaagcgagtcgattccacctacgcgcca
ggccaccgagacgggcgctgggtcaaagtcaaacacgcgcgaaacgccatcgcggctgtt
gggggcgtgatgtaccgcgacggggctccgaatgcgctgatgctcggtctgtttgacgac
caagcgcggctgattcacgtcggcaatgcgggagccggtcgcctcccccatcgcgcatgg
gaactactcgtcaagcgggtcctgtcccatgagataacgttgccacccttcgccaatgcg
ccgaaagtcgtgagaccgtgtcgattcgcgcaccccgtcgtcgccgtgaaggttcgcttc
gccgaatggacgccaaaagggaccatgcgccaccctgtcctcctcgccgagttggatatc
ccggcgacgcccgcggcgtgcagttttgcccaggccgatccgtga
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