KEGG   Aquifex aeolicus: aq_873
Entry
aq_873            CDS       T00013                                 
Symbol
rho
Name
(RefSeq) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
aae  Aquifex aeolicus
Pathway
aae03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aae00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    aq_873 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aae03021]
    aq_873 (rho)
   03019 Messenger RNA biogenesis [BR:aae03019]
    aq_873 (rho)
Transcription machinery [BR:aae03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     aq_873 (rho)
Messenger RNA biogenesis [BR:aae03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     aq_873 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_25 ATPase_2 DUF3086 SidC_lipid-bd
Other DBs
NCBI-GeneID: 1193573
NCBI-ProteinID: NP_213592
UniProt: O67031
Position
603214..604524
AA seq 436 aa
MTQQTAQQEQQKSEVKIYSREELKQKTLAELQKIGKELGLTRTTGLKKEELIEKILKAQL
EKSRLVFVKGVLEILPEGYGFLRMPENNYMPSWNDVYVAPSQIKKFGLRTGDTIEGFARL
PRENEKYKALIRMESVNGLPPDPEILKRRPQFEKLTPLHPMERFKLEYDPNELSTRVVSL
IAPIGKGQRGLIVAPPKAGKTVLLQKIAQAIIRNHPEVYLIILLIDERPEEVTEMRRIVK
DKAEVVASTFDEPPERHMQVAEIVVEKAKRMVELKKDVVILMDSLTRFTRASNAVTPPTG
RVLTGGIEITAFQRPKKFFGAARNIEEGGSLTIIATALVETGSKMDDVIYEEFKGTGNME
IHLDRRLMERRIFPAINIEKSGTRKEELLLEPWELQRIWVLRKFLSTMDPVEAMEFLLEK
LRRFKTNEEFLKAMNA
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgactcagcaaaccgctcaacaagaacaacaaaagagtgaagtaaaaatttacagcagg
gaagagttaaaacaaaagaccttagcggagctccagaaaatcgggaaggagctcggactc
accagaaccacgggacttaaaaaagaggagttaatagagaaaatactaaaagctcagctc
gaaaagagcagactcgttttcgtaaaaggtgtcctcgaaattctccccgaaggctacggc
ttcttaaggatgccggagaacaactacatgccaagctggaacgacgtttacgttgccccc
tcccagataaagaagttcggactcagaacgggagatacgattgagggctttgcgagactg
cccagagaaaacgaaaagtacaaggcgttgatcagaatggaatccgtgaacggacttccg
cctgaccccgaaatactcaagagaagaccccagtttgaaaagctcacaccccttcacccc
atggaaaggttcaaactcgagtacgacccgaatgagctctccacccgtgtggtcagcctg
atagcacctataggtaagggacagagaggattaatagtagcacctccgaaggccggaaaa
acggttctcctccagaaaatagcccaagctattataagaaaccacccagaagtttacctc
ataattctcctgatagacgaaagacccgaagaagtcactgaaatgagaaggatagtgaag
gacaaggctgaagtagtagcatctacttttgacgaaccacccgaaaggcacatgcaggtt
gcggaaatagtcgtggaaaaggcaaagagaatggtagaactcaagaaagacgtagtaata
cttatggactccttgacaaggtttacgagagcttctaacgcggtgactcctcctacgggc
agagttctcacgggtggtatagaaatcacagccttccagagacctaaaaagttctttggt
gctgcgcggaacatagaagagggaggaagcctcaccataatcgcaaccgctctcgtagag
acaggttcaaagatggacgatgtaatctacgaagagttcaaaggaacgggtaatatggaa
atacacctcgacagaagactaatggaaaggaggatattccccgccataaacatagaaaag
tcaggaaccagaaaggaagaactccttttagagccctgggaactccagaggatttgggtt
ctcaggaagttcctgtcaacaatggaccctgtggaggctatggaattcctccttgaaaaa
ctgagaaggttcaaaacgaacgaggagttccttaaagccatgaacgcttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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