KEGG   Arenibacter algicola: AREALGSMS7_00709
Entry
AREALGSMS7_00709  CDS       T04973                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
aalg  Arenibacter algicola
Brite
KEGG Orthology (KO) [BR:aalg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aalg03032]
    AREALGSMS7_00709 (topA)
   03400 DNA repair and recombination proteins [BR:aalg03400]
    AREALGSMS7_00709 (topA)
Enzymes [BR:aalg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     AREALGSMS7_00709 (topA)
DNA replication proteins [BR:aalg03032]
 Prokaryotic type
  DNA Topoisomerases
   AREALGSMS7_00709 (topA)
DNA repair and recombination proteins [BR:aalg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AREALGSMS7_00709 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim
Other DBs
NCBI-ProteinID: ASO04193
UniProt: A0A221USG9
Position
complement(820782..823271)
AA seq 829 aa
MAKNLVIVESPAKAKTIEKFLGKEYKVESSFGHIADLPSKELGVDVDNNFAPKYIVDKDK
KALVKKLKDLADKADTIWLASDEDREGEAISWHLAEELKLDKNKTKRIVFNSITKSAIQK
AIENPREINYDLVNAQQARRILDRLVGYELSPVLWKKIKPGLSAGRVQSVAVRLIVERER
EIEAFNPEAAFRISAEFKTNEGSIFTAKLNKTYASQKEAEAFLKENIGANFSVASLDKKP
AKKSPAAPFTTSTLQQEASRKLYFSVSRTMQVAQRLYEAGLITYMRTDSVNLSKDAIDAA
KDAIISNYGKEYSKVRNFTGKSKGAQEAHEAIRPTEMTNQSPSLERDQSKLYELIWKRTL
ASQMSDAELERTNVKIKTNTHKEEFTANGEVIKFDGFLKVYLEGTDDEDISEDQEGMLPA
MKEGEKLHNNYITATERFSRAPYRFTEASLVKKLEELGIGRPSTYAPTISTIQNRGYVEK
GTIEGTERNYVQLLLKSDKLTTKDLKENVGSDKGKMVPTDIGIIVTDFLVGHFETILDYH
FTAKVEEDFDEIASGDEDWQKVLKNFYGDFHPKVLDVEENADRASGERVLGTDPKTGRQV
SVRLGRFGPMVQVGTVDDEEKPLFASLLPDQSLNTISYEEAMDLFKLPRKLGVYEGEDVE
ANVGRFGPYIRFGKKFVSLGKDENAMEIDMDRAVELIKEKQKADAPIAIYENKEVTKGVG
RFGPFIKWDGMFINVSKKYDFDTLSKQDIEEIIEAKKQKEIDKLVQEWPEEGIRIEKARW
GRHSIIKGKIKVEVSKDVDATKISLKDAQELIEKKTPKKKTKAKPKAKK
NT seq 2490 nt   +upstreamnt  +downstreamnt
atggcaaagaatttagtaatcgtagagtccccggctaaagcaaaaacaattgagaaattt
ttaggtaaggaatataaggtagagtccagttttggacatattgccgatttgccttccaag
gaattaggagtggatgtggacaataattttgcgcctaaatatattgttgacaaggacaaa
aaggcccttgttaaaaagcttaaggacttggcggacaaagcggatactatatggcttgcc
agtgatgaagaccgtgaaggggaggcaatttcctggcacttggcagaggagttaaaattg
gacaagaataaaacaaagcggatagtttttaactctattaccaaatctgccattcaaaag
gcgattgaaaatcctagggaaattaattacgatttggtgaacgcccaacaggcaaggcgg
attttggacagattggtgggatacgaactttccccagtcttgtggaaaaaaattaaaccc
ggtttatctgcgggtagggttcaatccgttgcggtgagattaatagtagaaagggaacgg
gaaattgaagcttttaatccggaagcagcctttaggatatctgcggagtttaaaaccaat
gagggtagtatttttactgccaagttaaacaagacctatgccagccagaaagaggctgaa
gctttcttaaaagaaaatattggggcaaatttttcagttgccagcctagataagaaacct
gctaaaaaatcccctgcagcaccatttacaacttcaacattgcagcaggaagcttccagg
aaattgtatttttcagtttcaaggactatgcaagtggcacaacgcttatatgaggctggg
ttaataacctatatgagaacggatagcgttaacctatccaaagatgccatagatgctgca
aaggatgctattataagcaattacggtaaggaatacagtaaggtcagaaattttacaggg
aaatccaaaggagcacaggaggcacatgaggccatccgtcctacggagatgaccaatcag
tccccatcattggaaagggatcaatccaaattatacgaacttatatggaaacgtaccttg
gcttctcaaatgagtgatgccgaattggagcgtaccaatgttaaaataaagaccaatacc
cacaaggaagaatttacggccaacggggaggtaattaaatttgatggtttcctgaaggtc
tatttggaaggtaccgatgatgaggatataagtgaagatcaggaaggaatgcttccggcc
atgaaagagggtgaaaaactccacaataattatataacggcaacagaacgtttttccagg
gcaccttatagatttacagaggcttccttggtaaagaaattggaagaacttggaatagga
agaccgtctacctatgcgcctactatttccactattcagaataggggttacgtagaaaag
ggaaccattgaaggcaccgaaagaaattatgtacagctactgctgaaatccgataagctg
accacaaaggatttaaaggagaatgtgggttccgataaagggaaaatggtgcctacggat
attggaataatagtaaccgactttttggtaggacattttgagacaattttggattatcat
tttactgctaaagtggaagaagactttgatgagattgcttcgggtgatgaggattggcaa
aaagtattgaagaatttttatggggattttcatcccaaggttttggatgtggaggagaat
gcggatagggccagtggcgagcgcgttttggggacagatcccaagacgggaagacaggtt
tcggttagattgggccgttttgggcctatggtacaggtaggtaccgtagatgatgaggaa
aaaccattgtttgccagtctgttaccggaccagtccttgaatactatcagctacgaagaa
gctatggacctgtttaaattgccaagaaaacttggggtttatgaaggggaagatgtagag
gccaatgtgggccgatttggtccttatataaggtttggtaaaaagtttgtttcactgggc
aaggatgaaaatgccatggagatagacatggatcgggccgtggaactgatcaaggaaaaa
caaaaagcggatgcccctattgcaatttatgagaataaggaggttaccaaaggggtcgga
agatttggtccatttattaaatgggacggaatgttcattaatgttagtaagaaatatgat
tttgatactctttcaaaacaggatatcgaagagattatagaggccaaaaaacaaaaagaa
atcgataaattggtccaagaatggccagaagaaggtattcgaatagaaaaggccagatgg
ggcaggcatagtattatcaagggcaagatcaaggtggaagtttccaaggatgtggatgct
accaagatttcccttaaggatgcgcaggaattaatagagaaaaagacacctaagaaaaaa
accaaagcaaaacctaaggctaaaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (68)   
   KEGG ORTHOLOGY (1)   
   RefGene (65)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (78)   

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