KEGG   Aggregatibacter actinomycetemcomitans D11S-1: D11S_0426
Entry
D11S_0426         CDS       T00993                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
aat  Aggregatibacter actinomycetemcomitans D11S-1
Pathway
aat03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    D11S_0426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aat03400]
    D11S_0426
Enzymes [BR:aat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     D11S_0426
DNA repair and recombination proteins [BR:aat03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     D11S_0426
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD Helicase_C ResIII PriA_CRR zinc_ribbon_15
Other DBs
NCBI-ProteinID: ACX81836
Position
complement(389221..391590)
AA seq 789 aa
MLFHSSRTHFLLLKFDGILSLIQVKLNPKQQSYSPPNRQQSPKMLYSEPILFTEFPSMSF
ARIALPVPLHRYFDYILPTSLNVVVGARVWVPFGTQKRVGVVVEVAEQSDVSMEQLKPVQ
AYLDEVSLFSPQSWQFLQWAAGYYHAPLGEVLSQALPVKLRQGESAVEKPSVFWKPTALG
EQALTQGLLKRAKKQLEALQAANDLPEKGNNPFSAAIWSALKAKDYVTEVILETEIQTWQ
QQLGDKPLVNKADRLTLNKPQALVFSQLKFTQGFVPWLLDGVTGSGKTEIYLQFIEDILQ
QGKQVLVLVPEIGLTPQTVRRFQARFNVVIDVLHSNLNDTQRLQVWQRARNGQSAVVIGT
RSALFTQFAELGAIIIDEEHDASFKQQDGWRYHARDLAIVYAKQLNIPILMGSATPSLES
LNNVQSGKYRHLSLSEKANNSTALKQQIIDLKRQPIHNGLSDVLLKRMQAHLEKGNQVLL
FLNRRGFAPVLLCHECGWMAECRHCDKPYTYHQQHHVLRCHHCASQKPIPRQCGNCGSTQ
LITTGLGTEQLEATLKEAFPNYGIARIDRDTTARKGKLEDYLEDINQGKSQILIGTQMLA
KGHHFPNVTLVALVNVDSALFSLDFRAEERLAQLYMQVAGRAGRGSQQGEVLLQTHYPEH
PLLQSLLQKGYSQFAQNALALRKSIGLPPFGSQALFKAQSRYSEEAEQLLAQFVEYLQQI
KRNTAPELQILGPMPAPFSKKAGQYRWQLLLQHPSRAALQQVLTEFWRYQGDQPTKVRWI
LDVDPLDLS
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgctttttcattcatcccgtacgcatttcttgctccttaaatttgacggtattttatcc
cttatccaagtgaaattaaaccccaaacaacagagctattctcccccaaatagacaacaa
tcccccaaaatgctatattccgaacccattttattcactgaatttccgtccatgtcattt
gcccgaattgcgcttcctgtgccgttacatcgctattttgattatatcctgccgacgtcg
ctgaatgttgtcgtgggggcgcgggtgtgggtgccgtttgggacgcagaaacgtgttggc
gtggtggttgaggtggcggagcagtcggatgtgtctatggagcagttgaaaccggttcag
gcttatcttgatgaggtttccttattttccccgcaaagttggcagtttttgcagtgggca
gcggggtattatcacgcgcccttgggggaagtgttgtcgcaggcgttgccggtgaaattg
cggcagggcgaaagtgcggtggaaaaaccaagtgttttttggaaaccgaccgcacttggt
gagcaggcattgacgcagggtttattgaaacgcgcgaagaagcagcttgaagcgttgcag
gcggcgaatgatttgccggaaaaaggcaataacccttttagtgcggcgatttggtcggcg
ctgaaagccaaagattacgtcacggaagttattctggaaacggaaatccaaacctggcag
caacaattaggcgataagccgcttgtgaataaggcggatcgtttaacgttaaacaagccg
caagcgttagtgttcagtcagttgaaatttactcagggttttgtcccgtggttgttggac
ggcgtgacgggttccggcaaaacagaaatctatttgcaatttatcgaagatattttgcag
cagggcaagcaggtgctggtgttggtgccggaaatcggtttaacgccacaaacggtacgg
cgttttcaggcgcgttttaatgtggtcattgacgtgctgcattccaatttgaacgatact
cagcgtttgcaggtgtggcagcgggcgcgcaatgggcaaagtgcggtcgttatcggcacc
cgatctgcgttgttcacgcaattcgccgagttgggcgcgattattattgatgaagaacat
gatgcctctttcaaacagcaggacggctggcgttatcacgcgcgcgatttggcgattgtg
tatgcgaaacagctgaatatcccgattttaatgggatcggcaacgccaagtttggaaagt
ctgaataacgtgcaaagcggtaaatatcgccatttgtcgttgtcggaaaaagccaataat
tccaccgcacttaaacagcagattatcgatttaaaacgtcaacctattcacaatgggctg
tccgatgtgttgttaaaacgtatgcaggcgcatttggaaaaaggcaatcaggtgttgcta
tttctgaatcggcgcggttttgcgccggtactgttgtgccacgaatgcggctggatggcg
gaatgtcgccactgcgataaaccttacacttatcatcagcaacatcatgtgttgcgctgc
catcattgtgcttcacaaaagccgattccacgccaatgcggcaattgcggttccacccaa
ttaatcaccacgggcttaggcacggaacaactggaagcgacgttaaaagaggcgttccct
aactacggcattgcccgtatcgaccgcgacacaacggcacgtaaaggcaagctggaagac
tatttggaagatattaaccaaggcaaaagccaaattcttatcggcacccaaatgctggcg
aaagggcatcatttcccgaatgtcaccttagtggcattggtgaatgtggatagtgctttg
ttttcattggattttcgtgcggaagaacgattggcacagctttatatgcaggtggcggga
cgtgcagggcgcggttcgcaacaaggggaagtgttattacaaacccattaccccgaacac
ccgttactgcaaagtctgttacaaaaaggctatagccaatttgcgcaaaatgccttggcg
ttgcgtaaaagtataggcttgccgcctttcggttcgcaggcattattcaaagcgcaaagc
cgttatagcgaagaagctgaacaattgctggcgcagtttgtcgaatatttacaacagatt
aagcgaaacacggcgcccgagttgcaaattctcggcccgatgccggcgccgttcagtaaa
aaagcggggcaatatcgttggcagctattgttgcagcatccttccagagcggcgttgcag
caggtgttgacggaattttggcgttatcagggcgatcaacccacaaaagtgcggtggatt
ttagacgtggatccgttggatctgagttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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