KEGG T00447: AAur

Arthrobacter aurescens: AAur_3867

Entry

AAur_3867 CDS T00447

Gene name

ligC

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

aau Arthrobacter aurescens

Pathway

aau03410	Base excision repair
aau03420	Nucleotide excision repair
aau03430	Mismatch repair
aau03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:aau03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:aau03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:aau03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:aau03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

complement(4241184..4242248)

AA seq 354 aa
MDLPVMPPVSPMLAKSVPTIPDVGHYEPKWDGFRTIVFKDGDEIVLGSRNEKPMTRYFPE
VVEALRKNLPDKCVIDGEIVLIEGKRLEFEVLQQRIHPADSRVRMLAEKTPASMIAFDIL
ALGDENLMDKPFSERRAILERAFAKAEPPVYVTPAVTDLEQAQEWFVQLEGAGLDGVLSK
PLDGAYQPNKRVMFKTKHERTADCVVAGFRWHKTAKVVGSMLLGLHDDTGRLHHVGVVAS
FPMARREALVAELEPYQVELSEHPWGEWANQDETAGGSRMPGAQSRWSGGKDFSFVPLRP
ELVIEVKYDYMEGDRFRHTTQFRRWRPDRTPESCTYSQLEEPADYDLGEILRLP

NT seq 1065 nt +upstreamnt +downstreamnt
atggacctgcctgtgatgccacccgtctcgcccatgctcgccaaatccgttccgacaatc
cccgatgttgggcactacgagcccaaatgggacgggttccggaccatcgtcttcaaggat
ggcgacgagatcgtcctgggcagccgcaacgagaagccgatgacccgctacttccccgag
gtggtggaggcgctcaggaagaacctgccggacaaatgcgtgatcgacggcgagatcgtc
ctgatcgagggcaagaggctcgaattcgaagtactccagcaaaggatccaccccgccgac
agccgcgtccggatgctcgccgagaagaccccggcgtccatgattgcgttcgacatcctc
gcgctgggcgacgagaacctcatggacaagccgttctccgagcgccgcgccatcttggaa
cgtgcgttcgccaaggccgagccgcctgtctacgtgacgcccgcggtgacggatcttgaa
caggcgcaggagtggttcgtgcagttggaaggcgcgggactggatggtgtgctctccaag
ccgttggacggggcctaccaacccaacaagcgcgtgatgttcaaaaccaaacacgagcgc
acggcagactgtgtggtggcgggattccgttggcacaagaccgcgaaagttgtggggtcg
atgttgctcggcctgcacgatgacactggccggctgcatcatgtgggagtggtggcatcg
ttccctatggcccgcagggaggctttggtggcagaactggagccgtaccaggttgaactc
agcgagcacccatggggtgagtgggccaaccaggatgaaactgccgggggttcacgcatg
cccggcgcacaaagccggtggagcgggggtaaggacttctccttcgtgccgctgcgcccc
gaacttgtgatcgaagtaaagtacgactacatggaaggtgacaggttccggcacaccaca
cagttccgcaggtggcggccggacaggacccccgagagctgcacgtactcgcaactggaa
gagcctgccgactacgatctcggggaaatcctgaggctgccctag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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