KEGG A.avenae: Aave

Acidovorax avenae: Aave_1450

Entry

Aave_1450 CDS A.avenae

Gene name thyA

Definition thymidylate synthase (EC:2.1.1.45)

Orthology K00560 thymidylate synthase [EC:2.1.1.45]

Pathway aav00240 Pyrimidine metabolism
aav00670 One carbon pool by folate
aav01100 Metabolic pathways

Class Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:aav00240]
Metabolism; Metabolism of Cofactors and Vitamins; One carbon pool by
folate [PATH:aav00670]

SSDB

Motif Pfam: Thymidylat_synt
PROSITE: THYMIDYLATE_SYNTHASE

Other DBs NCBI-GI: 120610137
NCBI-GeneID: 4668056
JGI: Aave1450
UniProt: A1TM53

Position complement(1597018..1597857)

AA seq 279 aa
MNAPARPVRSQYEDFMRHVYTHGVAKGDRTGTGTRSVFGYQMRFDLNEGFPLVTTKKVHL
KSIITELLWFLTGSSSNHWLKERGVTIWDEWAREDGDLGPVYGVQWRSWPTPDGGHIDQI
SQVVETLRTHPDSRRIIVSAWNVADLDKMALMPCHAFFQFYVAPPQAAGERGKLSCQLYQ
RSADIFLGVPFNIASYALLTHMMAQQCNLEVGDFIWTGGDCHIYSNHFEQVELQLSRAPH
PYPTLHILRRPDSLFDYRFEDFEVRDYAHHPAIKAPVAV

NT seq 840 nt +upstreamnt +downstreamnt
atgaatgcccccgcccgccccgtgcgctcccagtacgaagatttcatgcgccacgtctat
acccatggcgtggccaagggcgaccgcaccggcaccggcacccgcagcgtgttcggctac
cagatgcggttcgacctgaacgagggctttccactggtcaccaccaagaaggtccacctc
aaatccatcatcacggagctgctctggttcctcaccggctccagcagcaaccactggctg
aaggagcgcggcgtcaccatctgggacgaatgggcccgcgaggacggcgacctggggccg
gtctacggcgtgcagtggcgcagctggcccacgccggacggcggccatatcgaccagatc
agccaggtggtcgaaacgctcaggacccatcccgactcgcgccgcatcatcgtcagcgcc
tggaacgtggccgacctggacaagatggccctcatgccctgccacgcgttcttccagttc
tacgtggcaccgccgcaggccgccggagagcggggcaaactgagctgccagttgtaccag
cgcagcgccgacatcttcctgggagtgcccttcaacatcgcgagctacgcgctgctgacc
cacatgatggcgcagcagtgcaatctggaggtgggcgatttcatctggacaggcggcgac
tgccacatctacagcaaccatttcgagcaggtggagctgcagctttctcgcgccccgcac
ccctatcccacgctgcacatcctgcgccggccggacagcctcttcgactaccgtttcgag
gatttcgaagtgcgcgactacgcgcaccatcccgccatcaaggcgccggtcgcggtctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-AAV (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (1)   
   PROSITE (1)   
All databases (16)

DBGET integrated database retrieval system