KEGG   Paracidovorax citrulli: Aave_3384
Entry
Aave_3384         CDS       T00451                                 
Name
(GenBank) NusA antitermination factor
  KO
K02600  transcription termination/antitermination protein NusA
Organism
aav  Paracidovorax citrulli
Brite
KEGG Orthology (KO) [BR:aav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aav03021]
    Aave_3384
   03009 Ribosome biogenesis [BR:aav03009]
    Aave_3384
Transcription machinery [BR:aav03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     Aave_3384
Ribosome biogenesis [BR:aav03009]
 Prokaryotic type
  rRNA transcription factors
   Aave_3384
SSDB
Motif
Pfam: NusA_N KH_5 HHH_5 S1 KH_2 KhpA-B_KH RNA_pol_A_CTD KH_1
Other DBs
NCBI-ProteinID: ABM33942
UniProt: A1TSK4
Position
complement(3740295..3741779)
AA seq 494 aa
MNRELLMLVEAISREKNVERDVVFGAVELALAQATKKLYPGEVDIRVAIDRDSGNYETFR
RWLVVPDDAGLQNPDAEELLMDAQERIADIEVGEYIEEGIESLPIGRIGAMAAKQVILQK
IRDAEREMLLNDFMSRGEKIFTGTVKRMDKGDIIVESGRVEGRLRRSEMIPKENLRNGDR
VRAMIMEVDLTLRGAPIILSRSAPEFMIELFRNEVPEIEQGLLEIKSCARDPGSRAKIAV
LSHDKRVDPIGTCVGVRGTRVNAVTNELAGERVDIVLWSEDPAQFVIGALAPANVSSIVV
DEEKHAMDVVVDEENLAIAIGRGGQNVRLASDLTGWKINIMDAAESAQKQANETDASRRL
FMEKLDVDEEIANILIEEGFSSLEEVAYVPLQEMLEIESFDEDTVNELRARAKDALLTME
IAREESVEGVSQNLRDLDGMTSELIGKLAEGGVHTRDDLADLAIDELTALTGQSEEEAKA
LIMKAREHWFAGQE
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgaatcgcgaactgttgatgttggttgaagccatttcgcgcgagaagaacgtggagcgc
gacgtggtgttcggcgccgtggagctggcactggcccaggccaccaagaagctctacccg
ggcgaggtggacatccgcgtggcgatcgaccgcgacagcggcaactacgagactttccgc
cgctggctcgtcgtgcccgacgacgccggcctgcagaacccggacgccgaggaactgctg
atggacgcgcaggagcgcatcgccgacatcgaggtcggcgagtacatcgaggaaggcatc
gagtccctgcccatcggccgcatcggcgccatggccgccaagcaggtcatcctgcagaag
atccgcgacgccgagcgcgagatgctgctcaacgacttcatgtcgcgcggcgagaagatc
ttcaccggcacggtcaagcgcatggacaagggcgacatcatcgtcgagtccggccgcgtc
gaaggccgcctgcgccgcagcgagatgatccccaaggaaaacctgcgcaacggcgaccgc
gtgcgggcgatgatcatggaggtggacctcacgctgcgcggcgcgcccatcatcctctcg
cgctccgcgcccgagttcatgatcgagctcttccgcaacgaggtgcccgagatcgaacag
ggcctgctggagatcaagagctgcgcccgcgaccccggcagccgcgccaagatcgccgtg
ctgtcgcacgacaagcgcgtggaccccatcggcacctgcgtcggcgtgcgcggcacgcgc
gtcaacgccgtgaccaacgagctggccggcgagcgcgtggacatcgtgctgtggtccgag
gacccggcgcagttcgtgatcggcgcgctggcgccggccaacgtgtcctccatcgtggtc
gatgaggaaaagcacgccatggacgtggtggtggacgaggagaacctcgcgatcgccatc
ggccgcggcggccagaacgtgcgcctcgcttccgacctgacgggctggaagatcaacatc
atggatgcggccgagtccgcccagaagcaggccaacgagaccgatgcgtcccgccgcctg
ttcatggagaagctcgacgtggacgaggaaatcgccaacatcctcatcgaggaaggcttc
tccagcctcgaggaagtggcctacgtgccgctgcaggagatgctcgagatcgagagcttc
gacgaggacacggtgaacgaactgcgcgcccgcgccaaggatgccctcctgaccatggag
atcgcccgcgaggaaagcgtggaaggcgtctcgcagaacctgcgggacctggacgggatg
acgtccgagctcatcggcaagctggccgagggcggtgtccatacccgtgatgatctggcc
gacctggccatcgacgaactgaccgccctgaccggccagtctgaggaagaagccaaggcc
ttgatcatgaaggcgcgcgaacactggttcgcggggcaagagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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