KEGG   Acidovorax citrulli: Aave_3606Help
Entry
Aave_3606         CDS       T00451                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
aav  Acidovorax citrulli
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:aav00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Aave_3606
Enzymes [BR:aav01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Aave_3606
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Aave_3606
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(3979427..3980242)
Genome map
AA seq 271 aa AA seqDB search
MPELPEVEVTRRGIADAVAGAVIESVVLGKSLRWPLGRAPEDLHGLRVVAVRRRGKYLLL
DLDRGMLLIHLGMSGSLRFDRSADAPGAHDHFLMATSRGTLRLKDPRRFGAVVWADSETS
PQAVKLLGRLGVEPLGDTFTLEGFVAALRASRLPVKQFLLGGRAVVGVGNIYASEALFLA
GIRPTARASSIGPLRARRLHEAIRAVLARAVERGGSTLRDFAGVDGNAGHFQLEAHVYGR
EGLPCRTCGTPIRSMRQGQRSTYYCIRCQRP
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagttgcccgaggtcgaagtcacgcgccgcggcatcgcggacgccgtggcgggt
gcggtgatcgagtccgtggtcctggggaagtcgctgcgctggcccctgggccgtgctccc
gaagacctgcacggcctgcgcgtcgtggccgtgcggcgccgcggcaagtacctgctgctg
gacctggaccgcggcatgctgctgatccatctcggcatgtccggaagtctgcgcttcgac
cggagcgccgatgcacccggcgcgcacgaccatttcctcatggccaccagccggggcacc
ctgcgcctgaaggacccgcgccgcttcggtgccgtcgtctgggcggattccgagacgagc
ccgcaagcggtgaagctgctgggccggctcggagtggaaccgctcggcgatacgttcacg
ctggagggcttcgtggcggcgctgcgggccagccgcctgcccgtcaagcagttcctgctc
gggggcagggcggtggtcggtgtcggcaacatctatgcgtccgaagcgctgttcctggcc
ggcatccggccgacggcgcgtgcctcgtcgatcgggcccctgcgcgcccggcgcctgcac
gaggcgatccgcgcggtgctggcccgggcggtggaacgaggcggcagcaccctgcgggac
ttcgccggcgtggatggcaacgccgggcatttccagctcgaagcccacgtctatgggcgc
gagggcctgccgtgccgtacctgcggcacgccgatacgctccatgcggcaggggcagcgc
agcacgtactattgcatccgctgccagcgtccctga

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