KEGG   Alteromonas stellipolaris R10SW13: AVL56_13730
Entry
AVL56_13730       CDS       T04403                                 
Name
(GenBank) cysteine desulfurase IscS
  KO
K04487  cysteine desulfurase [EC:2.8.1.7]
Organism
aaw  Alteromonas stellipolaris R10SW13
Pathway
aaw00730  Thiamine metabolism
aaw01100  Metabolic pathways
aaw01240  Biosynthesis of cofactors
aaw04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:aaw00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    AVL56_13730
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    AVL56_13730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:aaw03016]
    AVL56_13730
   03029 Mitochondrial biogenesis [BR:aaw03029]
    AVL56_13730
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:aaw02048]
    AVL56_13730
Enzymes [BR:aaw01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.7  cysteine desulfurase
     AVL56_13730
Transfer RNA biogenesis [BR:aaw03016]
 Eukaryotic type
  tRNA modification factors
   Thiolation factors
    AVL56_13730
 Prokaryotic type
    AVL56_13730
Mitochondrial biogenesis [BR:aaw03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Proteins involved in Fe-S cluster biogenesis
    AVL56_13730
Prokaryotic defense system [BR:aaw02048]
 DNA phosphothiolation system
  Sulfur modification proteins
   AVL56_13730
SSDB
Motif
Pfam: Aminotran_5 DegT_DnrJ_EryC1 Cys_Met_Meta_PP Beta_elim_lyase Pyridoxal_deC
Other DBs
NCBI-ProteinID: AMJ95252
Position
complement(3194420..3195598)
AA seq 392 aa
MSRLTPIYLDYAATTPVDPRVAEKMVQCLTLDGNFGNPASRSYRFGWMAEEAVDVARNQI
SDALNCDPREIVFTSGATESNNLAIKGVAEGYANNGKHIITVNTEHKAVLDTCEHLEKQG
FEVTYLDVDSSGLISVSQLEAAITDETILVSVMHVNNELGVVQDINAIGELCRAKNILFH
VDAAQSVGKLPIDLQALPVDLLSISAHKIYGPKGMGALYVRRRPKINLAAQIHGGGHERG
MRSGTLATHQIVGMGEAIHLAYQQLEQDSAHISELKTALWEGLSQLDDIHLNGHETQRIA
NILNVSFGGVDGESMMMAMNDIAVSSGSACTSASLEPSYVLRAIGRSSELAHAGIRFSIG
RFTTLDDITYVISKVIDVVTRLREATVLAASR
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgtctcgtttaacacctatttacttagattatgccgctaccacacctgtcgacccacgg
gttgcagagaaaatggtgcaatgcctgactctagatggcaatttcggtaatcctgcttcc
cgttcgtatcgttttggttggatggccgaagaagcagtagacgtcgcccgcaatcagata
agtgatgcgctgaactgcgacccacgtgaaattgtttttacctcgggtgcgacagagtca
aacaatttggctattaaaggtgtagccgaaggctatgcgaataacggcaaacatatcatt
accgttaataccgaacacaaagcagtacttgatacctgtgaacatttagagaaacaaggt
tttgaagtaacctatctagatgtagattcttctggccttatttcagtttcacagcttgaa
gcggcgataactgatgagactattttggtctcagtaatgcacgtcaataatgaattaggc
gttgttcaagatataaatgctattggtgagctttgccgagcgaagaacattttgtttcac
gtagatgcggcgcagagtgtaggtaaacttcctattgacttgcaagcgttgccagtcgat
ttgttatccatttcggcgcataaaatttatggtccgaaaggcatgggcgcgttatatgtt
cgccgtcggccaaaaatcaatttagccgcccaaattcatggtggcgggcatgaacggggt
atgcgttcaggcacactagcaacgcatcaaattgttggcatgggcgaagcaatacacctg
gcctatcagcagctagaacaggattcagcccacattagtgaattgaaaacagcgttgtgg
gaagggctaagccagttagatgatatccaccttaatggccatgaaactcagcgtatagcg
aacattttaaatgtgagttttggtggtgttgatggggaaagtatgatgatggcgatgaat
gatattgcggtatcctcagggtctgcctgcacatcggcaagcttagaaccttcatacgta
ttacgcgccattggtagaagtagtgaacttgctcacgctggaatacgttttagtataggt
aggttcaccacattagatgatattacctacgtcattagcaaagttatcgacgtggtaacc
cggttacgggaagcaacagtgctggctgcaagtcgttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system