KEGG   Croceibacterium atlanticum: WYH_00104
Entry
WYH_00104         CDS       T03925                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
aay  Croceibacterium atlanticum
Pathway
aay03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:aay00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    WYH_00104 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aay03021]
    WYH_00104 (rpoA)
   03400 DNA repair and recombination proteins [BR:aay03400]
    WYH_00104 (rpoA)
Enzymes [BR:aay01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     WYH_00104 (rpoA)
Transcription machinery [BR:aay03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     WYH_00104 (rpoA)
DNA repair and recombination proteins [BR:aay03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      WYH_00104 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD DUF211 IDH
Other DBs
NCBI-ProteinID: AKH41170
UniProt: A0A0F7KQS3
Position
81360..82415
AA seq 351 aa
MSVNMKNWQELKKPTALDIKAGGDKSRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
ITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALRMEGEGPKRLQLSMTGPAEVKAGDI
AVSGDIEVMNKDLVICHLDEGATLNMELTADTGKGYVPAVQNRPVDAPIGLIPVDSLYSP
IRQVSYKVENARVGQELDYDKLSLTIESDGTVTPEDAIAYAARILQDQLTLFVHFEDGIP
QPQSAMIGVAAQPEESDANQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAE
MLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgtccgtcaatatgaagaactggcaggaactgaagaagcccaccgcgcttgatatcaag
gccggtggcgacaagagccggaaggccacctttgtcgcggaaccgctggagcgtggtttc
ggcctcacgctcggtaacgcgctgcgtcgcgttctcctgtccagccttcagggtgcggcg
atcacctcgatcaagatcgagaatgtgctgcacgaattctccagcctcgccggtgtgcgc
gaggatgtcaccgacatcgtcctgaatgtaaaacagatcgctctcaggatggaaggtgag
ggtcccaagcgcctgcagctttccatgaccggcccggctgaagtgaaggcgggcgacatt
gctgtttccggcgatatcgaggtgatgaacaaggatctcgtgatctgccatctcgacgaa
ggcgccacgctgaacatggaactgaccgcggacacgggcaagggttatgtcccggccgtg
cagaaccgcccggtcgacgcgccgatcggcctgatcccggtcgattcgctctattcgcct
atccggcaggtcagctacaaggtcgagaatgcccgcgtcgggcaggaactcgattatgac
aagctttccctgaccatcgaatccgacggcacggtcacgcccgaggatgcgatcgcctat
gccgcgcgcatcctgcaggaccagctgaccctgtttgtccacttcgaagacggcatcccg
cagccgcagagcgccatgatcggcgttgccgcgcagccggaagagagcgacgccaaccag
ctcaaccgctatctgctcaagaaggtggacgagctcgaactgtcggtgcgttcggccaat
tgcctcaagaacgacaacatcatctatatcggcgacctggtccagaagaccgaagccgag
atgctgcgtacgccgaatttcggccgcaagtcgctcaacgagatcaaggaagtcctctcc
agcatgggcctgcgcctcggcatggacattccgggctggccgcctgagaatatcgaggaa
atggccaagaagctcgagcaggaactgctgggctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (37)   

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