KEGG   Croceibacterium atlanticum: WYH_00536
Entry
WYH_00536         CDS       T03925                                 
Symbol
lpd_1
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
aay  Croceibacterium atlanticum
Pathway
aay00010  Glycolysis / Gluconeogenesis
aay00020  Citrate cycle (TCA cycle)
aay00260  Glycine, serine and threonine metabolism
aay00280  Valine, leucine and isoleucine degradation
aay00310  Lysine degradation
aay00380  Tryptophan metabolism
aay00620  Pyruvate metabolism
aay00630  Glyoxylate and dicarboxylate metabolism
aay00640  Propanoate metabolism
aay00785  Lipoic acid metabolism
aay01100  Metabolic pathways
aay01110  Biosynthesis of secondary metabolites
aay01120  Microbial metabolism in diverse environments
aay01200  Carbon metabolism
aay01210  2-Oxocarboxylic acid metabolism
aay01240  Biosynthesis of cofactors
Module
aay_M00009  Citrate cycle (TCA cycle, Krebs cycle)
aay_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
aay_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
aay_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:aay00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    WYH_00536 (lpd_1)
   00020 Citrate cycle (TCA cycle)
    WYH_00536 (lpd_1)
   00620 Pyruvate metabolism
    WYH_00536 (lpd_1)
   00630 Glyoxylate and dicarboxylate metabolism
    WYH_00536 (lpd_1)
   00640 Propanoate metabolism
    WYH_00536 (lpd_1)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    WYH_00536 (lpd_1)
   00280 Valine, leucine and isoleucine degradation
    WYH_00536 (lpd_1)
   00310 Lysine degradation
    WYH_00536 (lpd_1)
   00380 Tryptophan metabolism
    WYH_00536 (lpd_1)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    WYH_00536 (lpd_1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aay04147]
    WYH_00536 (lpd_1)
Enzymes [BR:aay01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     WYH_00536 (lpd_1)
Exosome [BR:aay04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   WYH_00536 (lpd_1)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 NAD_binding_8 GIDA FAD_binding_3 HI0933_like AlaDh_PNT_C Lys_Orn_oxgnase Thi4 2-Hacid_dh_C 3HCDH_N EspA UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: AKH41595
UniProt: A0A0F7KS62
Position
551137..552546
AA seq 469 aa
MAENYDVIVLGSGPGGYVAAIRSAQLGLKTAIVERELLGGICLNWGCIPTKALLRSAEIY
HYMQHAKDYGLAAKEIEADLEAVVKRSRGVAKQLNQGVTHLMKKNKIAVHMGVGTFKNAN
TLEVKGDKGTETISAKHIIIATGARARDLPFAPADGKRVWTYRHAMTPKEMPSKLLVIGS
GAIGIEFASFYKDMGADVTVVEMLDRIVPVEDKDVSTFLEKQLTKQGMTIRTGAALEELK
VSDTGVSAKIKGKDGKVESSEFSHVIVAIGIQPNTENIGIEKLVEMDRGFIQIDPYGRTR
TKGVWAIGDCAPGPWLAHKASHEGVTAAEAIAQELGNEDVHPHPLDRNNIPGCTYCHPQI
ASVGMTEAKAKEAGYEVKVGNFPFIGNGKAIALGEPEGFVKTVFDAKTGELLGAHMIGAE
VTEMIQGYVVGKTLETTEAELMNTVFPHPTISETMHESVLGAYGRALHI
NT seq 1410 nt   +upstreamnt  +downstreamnt
gtggctgagaattacgacgttatcgtacttggttccggaccgggcggctatgttgcggcg
atccgttcggcgcagctcggtttgaaaacggccattgtcgaacgcgaactgctgggcggc
atctgcctcaactggggctgtatcccgaccaaggcgctgctgcgttcggcagagatctat
cattacatgcagcatgccaaggattatggccttgccgccaaggagatagaggccgatctt
gaagcggtggtgaagcgcagccggggcgttgcaaaacagctcaaccagggcgtgacgcat
ctgatgaagaagaacaagatcgccgtccatatgggcgtcgggacgttcaagaacgccaat
acgctggaagtgaagggcgacaagggcacggaaacgatcagtgccaagcatatcatcatt
gccaccggcgcacgcgcacgcgaccttcctttcgccccggcagatggcaagcgggtgtgg
acctatcgccatgcgatgacgcccaaggaaatgcccagcaagctgctggtgatcggatcg
ggcgcgatcggcatcgaatttgccagtttctacaaggatatgggcgccgatgttacggtc
gtggaaatgctcgaccggattgttccggtggaagacaaggacgtttcgaccttccttgaa
aagcagctgaccaagcagggcatgacgatccggaccggtgccgcgctggaagaactcaag
gtttccgacacgggtgtctccgccaagatcaagggcaaggacggcaaggtcgaaagcagc
gaattcagccatgttatcgtggccatcggcattcagcccaataccgagaatatcggaatc
gaaaagctggtggaaatggaccgcggcttcatccagatcgatccctatggccgcacccgg
acaaagggtgtgtgggccatcggcgattgcgcgcccggcccatggctggcgcacaaggca
agccatgaaggcgtgaccgcggcagaagcgattgcgcaggaactgggcaacgaggatgtt
cacccccatccgctggaccggaacaacatccccggctgcacctattgccatccgcagatc
gccagtgtcggcatgaccgaagcgaaggcaaaagaggccggatacgaagtgaaggtcggc
aatttccccttcatcggcaatggcaaggccatcgctctgggtgaacccgaaggtttcgtg
aaaaccgtgttcgacgcgaaaaccggcgaattgctgggcgcgcatatgatcggcgcggaa
gtgactgaaatgattcagggttatgtcgtcggcaagacgctggaaacgacggaagcggaa
ttgatgaacaccgtcttcccgcatccgacgatcagcgaaaccatgcatgaaagcgtgctg
ggcgcttacggccgggcactgcatatctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (96)   

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