KEGG   Aggregatibacter aphrophilus W10433: ADJ80_04320
Entry
ADJ80_04320       CDS       T04521                                 
Symbol
ligA
Name
(GenBank) aromatic ring-opening dioxygenase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
aaz  Aggregatibacter aphrophilus W10433
Pathway
aaz03030  DNA replication
aaz03410  Base excision repair
aaz03420  Nucleotide excision repair
aaz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aaz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ADJ80_04320 (ligA)
   03410 Base excision repair
    ADJ80_04320 (ligA)
   03420 Nucleotide excision repair
    ADJ80_04320 (ligA)
   03430 Mismatch repair
    ADJ80_04320 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aaz03032]
    ADJ80_04320 (ligA)
   03400 DNA repair and recombination proteins [BR:aaz03400]
    ADJ80_04320 (ligA)
Enzymes [BR:aaz01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     ADJ80_04320 (ligA)
DNA replication proteins [BR:aaz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     ADJ80_04320 (ligA)
DNA repair and recombination proteins [BR:aaz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     ADJ80_04320 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ADJ80_04320 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     ADJ80_04320 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      ADJ80_04320 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD HHH PTCB-BRCT HHH_3 BRCT_2 DZR_2
Other DBs
NCBI-ProteinID: AKU63032
UniProt: A0A3M6PHN4
Position
complement(862331..864346)
AA seq 671 aa
MTTSTQQQINDLRKTLRYHEYQYHVLDNPQIPDSEYDRLFHQLKALEQEHPELITADSPT
QRVGARPLSEFAQIKHELPMLSLDNAFSDEEFLAFVKRIQDRLGLVPEPLTFCCEPKLDG
LAVSILYVNGVLTQAATRGDGTTGEDITQNIRTIRNIPLQLLTDNPPERLEVRGEVFMPH
DGFERLNERALEQGEKTFANPRNAAAGSLRQLDPKITSQRPLVFNAYSIGVAQGIDLPPT
HFERLQWLKSIGVPVNSEIRLCDGIENVLNFYRTMMEKRSSLGYDIDGTVLKVNDIELQQ
KLGFISKAPRWAIAYKFPAQEELTVLNDVEFQVGRTGAITPVAKLQPVFVAGVTVSNATL
HNGDEIERLNIAIGDTVIIRRAGDVIPQIIGVVHDRRPANARQIVFPTRCPVCDSLIVRI
EGEAVARCTGGLFCAAQRKEALKHFVSRKAMDIDGVGAKLIEQLVDRELVHTPADLFKLD
LTTLTRLERMGPKSAENALASLEKAKHTTLARFIFALGIRDVGEATALNLANYFKTLEAL
QNADLEQLQQVPDVGEVVANRIFVFWREEHNVAVVNDLIAQGVHWETVEVQDVKENPFKD
KTVVLTGTLSQMGRNDAKALLQQLGAKVSGSVSAKTDYVIAGEAAGSKLSKAAELGVQVL
SEEEFLAWVNG
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgacaacttcaacccaacaacaaattaacgacctcagaaaaaccctgcgttatcacgaa
tatcaatatcatgtgttagacaatccgcagattcctgacagcgaatacgatcgtctgttt
catcagctcaaagccttagaacaagaacatcccgaactgatcaccgccgattcgccgacc
caacgcgtgggtgcgcggccgttgtcggaatttgcgcaaattaaacatgaacttccgatg
ctctcgttggataacgccttttctgatgaggaatttttggcgttcgtgaaacgtattcaa
gatcgtctaggacttgtgccagaaccattgacattttgttgcgaacctaaattggacgga
ttggcggtcagtattttgtatgtgaatggtgtgctgacccaagcggcaacgcgcggcgat
ggcacaacaggcgaagacatcacacaaaacattcgtaccattcgcaacattccgttgcag
ctactaacagataatccgcctgaacgcttggaagtgcgtggtgaagtgtttatgccgcac
gacggtttcgagcgcttaaatgaacgcgccttggaacagggagaaaaaacctttgctaat
ccgcgtaatgcggcagctggttccttacgccaattggatccgaaaatcaccagtcagcgc
ccgctcgtgttcaatgcttacagcatcggcgtcgcccaagggatagacttaccgccgact
cattttgaacgcctacaatggttgaaatccatcggcgtgccggtaaatagcgagatccgt
ttatgcgatggcattgaaaacgtgctgaatttctaccgcactatgatggaaaaacgtagt
tccttgggttatgacattgacggcacggtattaaaagtcaatgacattgaattgcaacaa
aaactgggctttatttccaaagcaccgcgttgggcaattgcttacaaatttcctgcacaa
gaagaactaacagtattaaatgacgtggaattccaagtcggtcgaaccggtgccatcacg
cctgtagccaagttgcaaccggtattcgttgccggtgtaacggtaagtaacgcaacctta
cataacggcgacgagatcgagcgtctcaacattgctatcggcgacacggtgattattcgt
cgcgccggcgatgtgattccgcaaattattggcgtcgtacatgatcgccgcccggccaat
gcgcgccaaattgtctttccaacgcgctgtccggtgtgcgattccttaatcgtacgcatt
gaaggcgaagcggtggcacgttgcacaggcgggttattctgtgcggcacaacgcaaagaa
gcgctaaaacatttcgtctcacgcaaagccatggacattgacggtgtaggtgccaaactg
attgaacagttggtggatcgcgaattggttcataccccggcagatttgttcaagttggat
ttaaccacactcacccgcttagaacgtatggggccgaagtctgctgaaaatgcgttagcc
agcttagaaaaagccaaacacacgaccctcgcccgttttatctttgcgttgggtattcgt
gatgtgggtgaagccacggcattaaatctggcaaactatttcaaaaccttagaagcgttg
caaaatgccgatttagaacagctgcaacaagtgcctgatgtgggcgaagtggtcgcgaat
cgcatttttgtgttctggcgtgaagaacacaatgttgcggtggtgaatgatctcatcgct
caaggcgtacattgggaaaccgttgaagtgcaggacgtgaaagaaaatccgttcaaagac
aaaaccgtggtgctcaccggcaccctttcccaaatgggacgcaacgacgccaaagcactg
ctacaacaactcggcgccaaagtcagtggcagtgtttcagccaaaaccgactatgttatc
gccggtgaagcggcaggttccaaactcagcaaagcggcagaattaggcgtgcaggtgttg
agtgaggaagagtttttggcgtgggttaatggataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (31)   

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