KEGG   Candidatus Koribacter versatilis: Acid345_0985Help
Entry
Acid345_0985      CDS       T00352                                 

Definition
bifunctional DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
aba  Candidatus Koribacter versatilis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:aba00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Acid345_0985
Enzymes [BR:aba01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Acid345_0985
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Acid345_0985
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1250915..1251814
Genome map
AA seq 299 aa AA seqDB search
MPELPDITAYLTALEPRVLGKTLQRVRITSPFLLRTIDPPLEAVERKRVLALRRIGKRIV
FGLEDDLWLVLHLMIAGRLHWKAAGVALKGRNYLAALDFDDGSLVLTEAGAKRRASLHLF
RGEAALRTVDPGGIDVFTADLDAFRAALTIENRTLKRALTDPRFLSGIGNAYSDEILWAA
QLSPIAQTHKLKSDEWQRLYDATRATLQTWIDRFAAEAAKKFPEKVTAFRPEMAVHGKYG
EPCPRCGEKVLRIRYADNETNYCARCQTGGRVLADRSLSRLLGSDWPRTLDELEALKHR
NT seq 900 nt NT seq  +upstreamnt  +downstreamnt
gtgccggaactccccgacatcaccgcgtacctcaccgcgctagaaccgcgcgtgcttggc
aaaacgctccagcgcgtccgcatcaccagccccttcctcctccgcaccatcgatccgccg
ctggaagccgtggaaaggaagcgcgtgctcgcgttgcggcgcatcggcaaacgcatcgtc
tttggattggaagacgatctctggctggtcttgcacctgatgatcgccggccgccttcac
tggaaagccgcgggcgtcgcgctgaaaggccgaaattaccttgccgcgctggatttcgac
gacggatcgctggtactcaccgaggccggcgcgaaacgacgcgcgtccttgcatcttttc
cgcggcgaagccgcgctgcgcaccgtggatcccggtggaattgacgtcttcaccgccgat
ctcgacgcatttcgcgcggcgctcaccatagaaaaccgcaccttgaagcgcgccctcacc
gatccgcgcttcctcagtggcatcggcaacgcctattccgacgaaatcctctgggccgcg
cagctctcacccatcgcgcaaacccacaagctgaaatccgacgaatggcagcgcctctac
gacgccacccgcgcgacgctgcaaacctggatcgaccgcttcgccgccgaggccgcgaag
aaattcccggagaaagtcaccgcgttccgtccggagatggccgtccacggcaagtacggc
gagccctgcccgcgctgcggcgagaaagtcctacgcatccgctacgccgacaacgaaacc
aactactgcgcgcgttgccagaccggcggccgcgtcctcgccgaccgcagcctatcgcgc
cttctcggctccgattggccgcgcactctcgacgaactcgaggccctcaagcaccgctag

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