KEGG T00352: Acid345

Candidatus Koribacter versatilis: Acid345_3634

Entry

Acid345_3634 CDS T00352

Gene name

murE

Definition

UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

aba Candidatus Koribacter versatilis

Pathway

aba00300	Lysine biosynthesis
aba00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:aba00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:aba00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase DUF1611

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(4302979..4304508)

AA seq 509 aa
MDFFQLIDGAEILSCSGNAGIHGVEYDSRRVKPGFCFLAMRGDSTDGNRYIDKAIELGAV
AIVTDSATEIPRPGVAWAICAHGRRALSRLSANFYKHPAEKLAITGVTGTNGKTTTTYIL
DSLLRHAGRKTAMIGTVEYHIADRVIPAPHTTPEPLELNQIFREALNEGATEAVMEVSSH
ALAQERVFGIPYDVAVFTNLTRDHLDFHGTMESYFQSKATLFKGCGTEPPRVGIINRDDE
WAEKFMKVANKHCDKVYTYGFAAGDFHAENAEMTSTGTRFDLVTPEGRVPIFSPLIGKVN
VLNLLAAAAAAMERGIHLDSLAESITHIVRPPGRFERVSAGQPFTVIVDYAHTDDALRNV
TKLARDFVQQAGGGRVITLFGCGGDRDKTKRPLMGKAAGEGSDLVVLTSDNPRSEDPQAI
INDVLPGLAQTPIKFIVEPDRRKAIGIAVANARLGDVVILAGKGHEKTQTTREGVFPFDD
AQVALETLHAAGYTAETEGSHHLHGSHIG

NT seq 1530 nt +upstreamnt +downstreamnt
atggacttcttccaactcatcgacggcgctgaaattctgtcctgctcgggcaatgccgga
atccatggagtggagtacgactcgcggcgagtgaagccaggcttttgtttcctcgccatg
cgcggtgattccaccgacggcaatcgctacattgataaggccatcgaactcggcgccgtc
gccatcgtcaccgactccgccaccgagattccgcgtcccggcgtggcttgggccatctgc
gcacacggacgccgcgccctttcgcgcctgagcgcgaatttctacaagcatccggcggaa
aagctggccatcaccggcgtcaccggcaccaatggcaagacgaccacgacctacatcctg
gactcgctgctccgccacgccggacgcaagactgccatgatcggcaccgtggaatatcac
attgcggaccgcgtcatccccgcgccgcacacaacgcccgaaccgctggaactgaaccag
atctttcgcgaggcgttgaatgaaggcgccaccgaagccgtgatggaagtctcgtcccac
gctctggcgcaggagcgtgtcttcggcattccctacgacgtcgcggtgttcaccaacctc
acccgcgaccacctcgacttccacggcaccatggagagctacttccagtcgaaggcaacg
ctgttcaaaggctgcggcaccgagccaccgcgcgtcggcatcattaatcgtgacgacgag
tgggccgagaagttcatgaaagtcgcgaacaagcactgcgacaaggtctacacctacggc
tttgcagcgggcgacttccacgccgaaaacgccgagatgacgtcaaccggcactcgcttt
gacctggtgacgcccgaaggcagggtcccgatattcagcccgctcatcggcaaggtgaac
gtgctgaacctgctcgccgcagcggccgctgcaatggaacgcggcattcatctggacagc
cttgccgagtcgatcacgcacatcgtgcggccgccgggccgctttgagcgcgtgagcgcg
ggccagccgttcaccgtgatcgtggactacgcccacaccgacgacgccctacgcaacgtc
accaaacttgcgcgcgacttcgtgcagcaggccggcggcggccgcgtgatcacgctcttc
gggtgcggtggcgaccgagacaagaccaagcgcccgctgatggggaaagccgcgggcgaa
ggcagcgacctcgtggtgctcacctccgacaacccgcgcagcgaagatccgcaggctatc
attaacgacgtcctgcccggcctcgcgcagacaccgatcaagttcatcgtcgagcctgac
cgccgcaaggccatcggcattgccgtcgccaacgcgcgtctcggcgacgtcgtcatcctt
gccggaaaaggccacgaaaaaacgcagaccacgcgcgaaggcgtcttccccttcgacgat
gctcaggtcgcgctcgagaccctacacgcagccggttacaccgcagaaaccgaaggctcc
catcatttgcacgggagccatatcggatga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ABA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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