KEGG T00352: Acid345

Candidatus Koribacter versatilis: Acid345_4707

Entry

Acid345_4707 CDS T00352

Definition

malate synthase

Orthology

K01638

malate synthase [EC:2.3.3.9]

Organism

aba Candidatus Koribacter versatilis

Pathway

aba00620	Pyruvate metabolism
aba00630	Glyoxylate and dicarboxylate metabolism
aba01100	Metabolic pathways
aba01120	Microbial metabolism in diverse environments

Module

aba_M00012

Glyoxylate cycle

Class

Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:aba00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:aba00630]

SSDB

Motif

Pfam:

Malate_synthase HpcH_HpaI Casc1

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(5566723..5568297)

AA seq 524 aa
MVTTANLPTAVGFQLNTAPAGFNPKRDLAPGLYEFLETLHHEFTPRQQKLVAKRKRVLEA
SHRAELPEHMQPSEATQGNWRIELPKWCEDQRNQMTGPADEAELVGKMLNSGAPGVMLDL
EDSTVNQWDHQQLGMKNVLSALHGELTYYDQKRGKEVAIKESNVVIWTRARGMHLNQAGV
MPEVMSASLFDVGSLAYQVDTSKVKHNLCIYIPKSESAEEALWWRDLFEKIEDLRGWPKG
YIKCMALVESHPLAYQMEEFLYNLRDHILGLNLGRWDYMASLIHFNLEDPEFVLPDRNAI
PHDVLFFQNLRELIPEICHKRGALAIGGMTALYPSREDAELNARALDVLAKDKKNEANSL
MDGAWTGHPDQNQIAVDQFPKPNQLHARRANAQRYPDLRPAPKGVGKRTLNGTRAAVRTV
IRYRNGVLNGKGASLLDGYMEDLATDRIYRLMIAQRRKHSTVVPITDDDGHSVEHTAELV
TRLFDEELEKLIAKPGKDLGSPETFREARRIAEAMVKNGEFDPF

NT seq 1575 nt +upstreamnt +downstreamnt
atggttaccacggcgaatttaccaaccgcagtcgggttccagctgaacaccgcaccggcg
ggcttcaatccgaagcgcgacctcgcgcccgggctctacgaattcctcgaaacattgcat
cacgagttcacgccacgacagcaaaagttggtggcgaagcgtaaacgcgtgttggaagcg
tcgcatcgggccgagctgccggaacatatgcagccctcggaggccacgcagggtaactgg
cgcatcgagttgccgaagtggtgcgaagaccagcgcaaccagatgaccggtccggcggac
gaagcggagctcgtagggaagatgttgaactccggcgcgcccggggtgatgctcgatctg
gaagactccaccgtcaatcaatgggaccaccagcagctcggcatgaagaacgtgctgagc
gcgctgcacggcgagctcacgtactacgaccagaagcgtggcaaggaagtcgcgatcaaa
gagagcaacgtcgtcatctggacgcgcgctcgtggcatgcatttgaaccaggcaggcgta
atgccggaggtgatgtcggcctcgctgttcgacgtcggttcgctggcgtaccaggtggat
acgagcaaggtgaagcacaacctttgtatctacattccgaagagcgagagcgcggaagaa
gcgctatggtggcgcgatctgttcgagaagatcgaggacctgcgcggctggccgaagggc
tacatcaagtgcatggcgctggtggagtcgcatccgctggcgtaccagatggaagaattt
ctctacaacctgcgagatcacattctcgggttgaatctcggccgctgggattacatggcg
agcctgattcacttcaatctggaggatccggagtttgtgctgccggaccgcaacgcgatt
ccgcacgatgtgctgttcttccagaatttgcgcgagctgattccggaaatttgccacaag
cgcggagcgctggcgatcggcgggatgaccgcgttgtatccgagccgcgaagacgcggag
ttgaatgcgcgcgctctggacgtgctcgccaaagacaagaagaacgaagccaacagcctg
atggacggcgcgtggacagggcatcccgatcagaatcagatcgcggtggaccagtttccg
aagccgaaccaactgcacgcacggcgcgcgaacgcccagcggtatccggatttgcgtccg
gcgccgaagggcgtaggaaagcgcacgctcaatggcacgcgcgctgcggtacgcaccgtg
attcgctatcgcaatggcgtgctgaacggcaaaggcgcaagcctgctggatggctacatg
gaagatctggcgacggaccgcatctatcgcctgatgattgcgcaacggaggaaacattcg
actgtcgttccgattactgacgacgacggccactccgttgagcacactgctgaactcgtt
acccggctcttcgatgaggagttggaaaaactaatcgcgaagccaggaaaagacctgggc
tcgcccgaaaccttccgcgaagcaagacggatcgcggaagccatggtgaagaacggcgag
ttcgatccgttctag

All links

Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ABA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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