KEGG   Candidatus Nanopelagicus limnes: B1s21122_03005
Entry
B1s21122_03005    CDS       T05073                                 
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
  KO
K01159  crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
Organism
abam  Candidatus Nanopelagicus limnes
Pathway
abam03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:abam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    B1s21122_03005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:abam03400]
    B1s21122_03005
Enzymes [BR:abam01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.10  crossover junction endodeoxyribonuclease
     B1s21122_03005
DNA repair and recombination proteins [BR:abam03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     B1s21122_03005
    RecFOR pathway proteins
     B1s21122_03005
SSDB
Motif
Pfam: RuvC Glyco_trans_4_4 WHEP-TRS MadL
Other DBs
NCBI-ProteinID: ASY09313
UniProt: A0A249JXP9
Position
complement(693233..693754)
AA seq 173 aa
MRVLGIDPGLTRCGIGIVDSVGPQKLEMVGVGVIKTDIDAGLEFRLLELEKEISIWINKY
KPDVIAVERVFSQLNVKTAMATGQAAGVALLLAAKAGIPVVLHTPSEVKAAVTGSGRADK
KQVAQMVKRLLNLKEIPKPVDSTDALALAICHHWRGVGNARLASAKKKAIKKR
NT seq 522 nt   +upstreamnt  +downstreamnt
atgcgagttttaggaattgacccaggacttacgagatgcggtattggcattgttgattca
gttggacctcaaaaacttgaaatggttggggtaggagttattaaaactgatattgatgct
ggccttgaatttagattattggagttagaaaaagagatctcaatttggataaataaatat
aagccagatgtaatcgcggtggagcgagtgttctctcaactaaatgttaaaactgctatg
gcaactggccaagctgctggagttgctttgcttttggcggctaaggcaggcatccccgtt
gttttacatacccctagtgaggttaaggccgcggtgactggttctggccgggcggacaaa
aaacaggttgcacagatggttaagcgattacttaatttaaaggaaattccaaaacccgtt
gatagcaccgatgccttagcactggcgatctgccatcattggcgaggagttggtaatgcc
aggttggcaagtgccaaaaagaaggcaattaaaaagcgatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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