KEGG   Trichophyton benhamiae: ARB_03348
Entry
ARB_03348         CDS       T01611                                 
Name
(RefSeq) hypothetical protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
abe  Trichophyton benhamiae
Pathway
abe03040  Spliceosome
abe04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:abe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ARB_03348
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    ARB_03348
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:abe03041]
    ARB_03348
   04121 Ubiquitin system [BR:abe04121]
    ARB_03348
   03400 DNA repair and recombination proteins [BR:abe03400]
    ARB_03348
Enzymes [BR:abe01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     ARB_03348
Spliceosome [BR:abe03041]
 Complex B
  Other components
   Prp19 complex
    ARB_03348
 Complex C
   Prp19-CDC5 complex
    ARB_03348
Ubiquitin system [BR:abe04121]
 Ubiquitin ligases (E3)
  U-box type E3
   ARB_03348
DNA repair and recombination proteins [BR:abe03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    ARB_03348
SSDB
Motif
Pfam: Prp19 ANAPC4_WD40 WD40 Coatomer_WDAD eIF2A V_ATPase_I_N Cytochrom_D1 NBCH_WD40 VID27 Ge1_WD40 Nup160 Frtz
Other DBs
NCBI-GeneID: 9524759
NCBI-ProteinID: XP_003010647
UniProt: D4B4F9
AA seq 487 aa
MEIGISYQVENEFEKLQRRSKATSSAMLCARNVFEKRLVEEYISEHGKEPITGEEHTVED
LVELKSARIARPRPPTLTSIPSLLGVFQEEWDALALETFTLRQTLAQTRQELSTALYQHD
AAVRVIARLRKERDEARDALSKISVGASRAPAAGDAMQVDSTGLPEGVISRIEETQEKLS
KTRRKRPIPEDWATGETIQEFKPSSPSEALYPGGHSISLNASGELALVGGTDGVAGIYSL
PEKRVVASLKGGSGSITDSAWVGDKAVIATSTGAVKVFENESEAASFNVHAGTAAALAVH
PTGDIVASVGIDKSYTLYDISSSSVITQIFTDAALSCVKFHPDGHLLAAGSADGQIKIFD
VKSGTSAATFDMSGPIKALYFSENGTWLAAVTKDSSDISVWDLRKSTVVKVLETGSRVDS
ISWDYTGQFLLTGGPNGITVQQYSKASKSWTEPLRSAVPSTAVAWGPSAQSILSLNGDGV
IVSVSAQ
NT seq 1464 nt   +upstreamnt  +downstreamnt
atggaaatcggaatttcgtatcaagttgaaaacgaattcgagaagctccaaaggcggtcc
aaagcaacttcatcagccatgctgtgcgcgagaaacgtcttcgagaagcgtctggtggag
gagtacatttccgagcatgggaaggaacccatcacaggcgaggagcataccgtggaggac
cttgtcgaactgaagtcagctcgcattgcgagacctcgaccgccaacccttacctcgatc
ccctcgttactcggagttttccaggaagaatgggatgccctggctctcgaaacatttact
cttcggcagacacttgcgcagacgcggcaggaacttagtacggcattgtaccagcatgat
gctgctgttcgtgtgattgctaggctgcgaaaggagcgagacgaagccagagatgcactt
tcaaaaatatcagttggagctagccgtgctcctgcagctggggatgcgatgcaggtggat
agcacaggtcttccagaaggtgtcatctcaaggattgaagaaacccaagagaaactttca
aagactcgacgcaaacggcctattccagaagactgggccaccggtgaaaccattcaggag
tttaagccttctagcccgtccgaagccctttaccctggtggacactctatatcactgaac
gcctctggcgaactagccctcgtaggaggcactgacggtgttgccggcatatattccctt
ccagagaaacgagttgtggcctctctaaagggcggcagtggttccataacagactccgct
tgggtcggagacaaggccgtcattgcaacttccactggtgctgtcaaggtctttgagaat
gaatcagaggccgccagcttcaacgtccatgctggtacagctgcagctctcgctgtgcat
ccaacgggtgatattgttgcctctgttggcattgacaagagctacactctctatgatatc
tctagctcttccgtcattactcagatattcaccgacgccgctctatcctgcgtcaaattc
catcctgatggtcaccttctagctgccggcagcgctgacggccaaatcaaaatattcgat
gtcaagagcggcaccagcgcagctaccttcgacatgtccggtcccatcaaagcgctgtac
ttctctgaaaacggcacctggcttgctgcagtgacgaaggactcctcggacatatcagtc
tgggacctccgtaaatcgacagtcgtgaaggtgctggaaaccggtagccgagtcgactcc
atcagctgggactacacgggacagttcctcctcaccggtggaccaaacgggattacagtg
cagcagtattccaaggcctcaaagtcctggacagagccgttgcggagtgcggtgccttcc
actgcagttgcctggggtccctctgcccagagtatcttgtcacttaatggagacggcgtt
attgtgtcagttagtgctcagtga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (37)   

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