KEGG   Azospirillum brasilense Sp7: AMK58_00450
Entry
AMK58_00450       CDS       T04566                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
abf  Azospirillum brasilense Sp7
Pathway
abf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AMK58_00450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abf03021]
    AMK58_00450
   03019 Messenger RNA biogenesis [BR:abf03019]
    AMK58_00450
Transcription machinery [BR:abf03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     AMK58_00450
Messenger RNA biogenesis [BR:abf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AMK58_00450
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 OB_RNB AAA_22 NACHT AAA
Other DBs
NCBI-ProteinID: ALJ34006
UniProt: A0A560CHF0
Position
95848..97104
AA seq 418 aa
MHLQELKCKSPAELLAFAEELQIENASTLRKQDMMFAILKQLAENDVPIYGDGVLEVLQD
GFGFLRSPEANYLPGPDDIYVSPSQVRRFSLRTGDTVEGQIRAPKDGERYFALLKVNTIN
FDAPDKVRHRINFDNLTPLYPEERLRMEVDDPTKKNYTGRIIDLVAPLGKGQRGLIVAPP
RTGKTVMLQNIAHSIATNHPEAYLIVLLIDERPEEVTDMARSVRGEVISSTFDEPATRHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKLSDKRTFPAIDI
SKSGTRKEELLVDKGTISKMWILRRILMPMGVTDAVDFLVDKLKHTKSNSEFFESMNQ
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgcatctccaagagctgaagtgcaagagccccgccgaactgctggcgttcgcggaggaa
ctgcagatcgagaacgccagcacgctgcgcaagcaggacatgatgttcgccatcctcaag
cagctggcggaaaacgatgtcccgatctacggcgacggcgtgctcgaggttcttcaggac
ggcttcgggttcctgcgctcgccggaggccaattatcttcccggccccgacgacatctac
gtcagccccagccaggtgcgccgcttcagcctgcgcaccggcgacacggtcgaggggcag
atccgcgcgcccaaggatggcgagcgctacttcgcccttctcaaggtcaacacgatcaac
ttcgatgcgccggacaaggtccgccaccgcatcaacttcgacaacctgaccccgctctat
ccggaagagcggctgcgcatggaagtcgacgacccgaccaagaagaactacacgggccgc
atcatcgacctcgtggcgccgctgggcaagggccagcgcgggctgatcgtcgccccgccg
cgcacgggtaagaccgtgatgctgcagaacatcgcccattccatcgcgaccaaccacccg
gaagcctatctgatcgtcctgctgatcgacgagcgtccggaagaggtgaccgacatggcc
cgctccgtgcggggcgaggtcatcagctccaccttcgacgagccggcgacccgccacgtt
caggtcgccgagatggtcatcgagaaggccaagcggctggtcgagcacaagcgcgacgtg
gtcatcctgctggactccatcacccgtctggcccgcgcctacaacaccgtcgttccctcc
tcgggcaaggtgctgaccggcggcgtggacgccaacgcgctgcagcgcccgaagcgcttc
ttcggtgcggcccgcaacatcgaggagggcggctcgctgaccatcatcgcgaccgcgctg
atcgacaccggcagccgcatggacgaggtgatcttcgaagagttcaagggcacgggcaac
tcggagatcgtgctggaccgcaagctctccgacaagcgcaccttcccggccatcgacatc
tccaagtcgggcacccgcaaggaggagctgctggtcgacaagggcaccatctcgaagatg
tggatcctgcgccgcatcctgatgccgatgggcgtgaccgacgcggtggacttcctggtc
gataagctgaagcacaccaagtcgaactcggaattcttcgaatccatgaaccagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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