KEGG   Alcanivorax borkumensis: ABO_1566Help
Entry
ABO_1566          CDS       T00380                                 

Gene name
fadB
Definition
(GenBank) fatty oxidation complex alpha subunit
  KO
K01782  3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Organism
abo  Alcanivorax borkumensis
Pathway
abo00071  Fatty acid degradation
abo00280  Valine, leucine and isoleucine degradation
abo00281  Geraniol degradation
abo00310  Lysine degradation
abo00362  Benzoate degradation
abo00380  Tryptophan metabolism
abo00410  beta-Alanine metabolism
abo00640  Propanoate metabolism
abo00650  Butanoate metabolism
abo00903  Limonene and pinene degradation
abo00930  Caprolactam degradation
abo01040  Biosynthesis of unsaturated fatty acids
abo01100  Metabolic pathways
abo01110  Biosynthesis of secondary metabolites
abo01120  Microbial metabolism in diverse environments
abo01130  Biosynthesis of antibiotics
abo01200  Carbon metabolism
abo01212  Fatty acid metabolism
Module
abo_M00087  beta-Oxidation
Brite
KEGG Orthology (KO) [BR:abo00001]
 Metabolism
  Carbohydrate metabolism
   00640 Propanoate metabolism
    ABO_1566 (fadB)
   00650 Butanoate metabolism
    ABO_1566 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    ABO_1566 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    ABO_1566 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    ABO_1566 (fadB)
   00310 Lysine degradation
    ABO_1566 (fadB)
   00380 Tryptophan metabolism
    ABO_1566 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    ABO_1566 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    ABO_1566 (fadB)
   00281 Geraniol degradation
    ABO_1566 (fadB)
  Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    ABO_1566 (fadB)
   00930 Caprolactam degradation
    ABO_1566 (fadB)
Enzymes [BR:abo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     ABO_1566 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     ABO_1566 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     ABO_1566 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 3HCDH_N ECH_1 ECH_2 3HCDH AlaDh_PNT_C PALP NAD_binding_2 2-Hacid_dh_C Sacchrp_dh_NADP F420_oxidored NAD_binding_7 UDPG_MGDP_dh_N Shikimate_DH
Motif
Other DBs
NCBI-ProteinID: CAL17014
UniProt: Q0VP84
Position
complement(1787227..1789392)
Genome map
AA seq 721 aa AA seqDB search
MSEQTAIRWEKDADNIVVLTLDDPNQSANTMNELYGKSMAAVVERLEKEKDEIAGVIITS
AKKTFFAGGDLRDLLKARKEDGPQFMAGMAQLKSQLRTLETLGKPVVAAMNGTALGGGLE
IALACHHRIAINDKSAQFGLPEVSLGLLPGGGGVTRVVRMLGIQDGLMKVLMQGQRMKAE
KAQKVGLIDELVADRDEMMAKAREWIKANPKAQQPWDQKGYKIPGGDPKNPKFAANLPAF
PANLKKQLKGANYPAPLAIMSAAIEGAAVDFDSAALIEGRYFLSLVTSQVAKNMITAFFF
NLQAINGGASRPDGVEKFRAEKVGVLGAGMMGAGVAYVTARSGAQVVLKDVSAENAEKGK
DYSRKLLDKEISKGKMTQEKKEEILGRITATADAKDLEGVDFVIEAVFENTELKHKVFQE
IEDVVNPDAVLGSNTSSLPITGLAQGVKKQNNFIGIHFFSPVDKMPLVEIICGKDTSPEA
LAKTYDYCLQIKKTPIVVNDARGFFTTRVIGTFVNEGIAMLGEGVSAQSIEQAAMQAGYP
VGTLNLIDEINMETALKIGNAARDDAKREGVEPPPEHPAEVVMKKMVEELGRPGKLQGKG
FYEYPENGKKHLWSGLADAFGGSKDMPFEDIKERMMFIESIEAVKCFDEGVIDSVADANI
GSIFGIGFPAWSGGVMQYINQYEGGLSGFVARAEELAKLYGERFTPPASLVEKAKKGEIY
K
NT seq 2166 nt NT seq  +upstreamnt  +downstreamnt
atgagtgaacaaactgctattcgttgggaaaaagacgcggacaatattgtcgttctgacc
ctggatgatcccaaccagtccgccaacaccatgaatgagctgtacggcaagtccatggca
gcggtcgttgagcgtctggagaaagaaaaagatgaaattgctggggtgatcattacctct
gcgaaaaaaactttctttgccggtggcgacctgcgtgacttactgaaggcgcgtaaggaa
gatggcccgcagtttatggccggaatggcccagcttaaaagtcagctgcgtacgctggaa
acactcggcaagccagtggttgcggccatgaatggcacggctttgggtggtggtttggaa
atcgccttggcctgtcatcaccgcattgctatcaatgataaatctgcgcagtttggtctg
cctgaagtatccctgggcttgctgcccggtggcggtggcgtgactcgcgtggtacgcatg
ctgggtattcaggatggcctgatgaaggtgctgatgcagggtcagcgcatgaaagcggag
aaagcgcagaaggtcgggctgatcgacgagctggtagcagatcgtgacgaaatgatggcc
aaggctcgtgagtggattaaggccaacccgaaagcccagcaaccctgggaccagaaaggt
tacaaaattcccggtggtgacccgaagaaccctaagtttgcggctaacttgccggctttc
ccagcgaacctgaagaaacaactgaagggcgctaactatccggccccgctggcaatcatg
tctgcggccatcgaaggtgcggcagtagattttgatagcgccgctcttattgaaggtcgt
tatttcctttctttggtgaccagtcaggttgccaagaacatgattaccgccttcttcttc
aacttgcaggccatcaatggtggcgcgagccgtccggatggggttgaaaaattccgtgct
gagaaggtcggggttttaggtgctggcatgatgggcgcaggcgtggcctatgtaacggct
cgctctggtgcgcaggtggtgttgaaggatgtttccgccgagaatgcggaaaagggtaaa
gactattcccgtaagcttctcgacaaggaaatctccaagggcaagatgacccaggagaag
aaagaggaaatccttggacgtattaccgccaccgccgatgcgaaagacctggaaggcgtg
gattttgtgattgaagctgtgttcgaaaacactgagctgaagcacaaggttttccaggaa
atcgaagacgtggttaatccggatgcggtgttgggttctaacacctcttcgctgccgatc
actggcttggcccagggcgttaagaagcagaataacttcattggtattcatttcttcagc
ccggtggacaagatgccgctggtggaaattatctgcggtaaagatactagcccggaagcg
ttggccaagacctacgactactgcttgcagatcaagaaaaccccgatcgtggtcaacgat
gcccgtggcttcttcaccacccgcgtcattggtactttcgtcaatgaaggcatcgctatg
ctgggtgagggcgtcagtgcccagtccattgagcaggcggcgatgcaggcaggctatccg
gtgggtacccttaacctgatcgatgaaatcaacatggaaaccgcactgaagattggtaat
gcggcccgtgatgatgccaagcgtgaaggggttgagccgccgccagagcatcccgctgaa
gtggtcatgaaaaagatggtcgaagagctgggccgtccaggcaagttgcaaggtaaaggc
ttttacgagtatccagaaaacggcaagaagcacctgtggtccggtttggctgatgccttc
ggtggcagcaaagatatgccgttcgaggatatcaaagagcgaatgatgttcattgagtcc
atcgaagcggtgaaatgctttgacgaaggtgtgattgactcagtagcggatgccaatatc
ggttctatctttggtatcggcttcccggcctggtctggtggtgtgatgcagtacatcaac
cagtacgaaggcggcctgagcggctttgttgcacgggctgaggaactggccaagctctac
ggtgagcgtttcaccccgccagcttctctggtagaaaaagcgaaaaaaggcgaaatctac
aagtaa

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