KEGG A.borkumensis: ABO

Alcanivorax borkumensis: ABO_1798

Entry

ABO_1798 CDS A.borkumensis

Gene name alarS

Definition alanyl-tRNA synthetase (EC:6.1.1.7)

Orthology K01872 alanyl-tRNA synthetase [EC:6.1.1.7]

Pathway abo00970 Aminoacyl-tRNA biosynthesis

Class Genetic Information Processing; Translation; Aminoacyl-tRNA
biosynthesis [PATH:abo00970]

SSDB

Motif Pfam: tRNA-synt_2c tRNA_SAD DHHA1 Shugoshin_N YscO GldM_N TMF_DNA_bd
FeoB_N
PROSITE: AA_TRNA_LIGASE_II_ALA

Other DBs NCBI-GI: 110834659
NCBI-GeneID: 4211293
UniProt: Q0VNK2

Position complement(2046828..2049530)

AA seq 900 aa
MLPLGVCCFRLTCHHRNHALRAVYSAPLTASQENVSLMKSAELRQAFLDYFASQGHTKVS
SSSLVPANDPTLLFTNAGMNQFKDVFLGRESRDYTRATSSQRCVRAGGKHNDLENVGYTA
RHHTFFEMLGNFSFGDYFKREAIKFAWEFLTGTLGLPEERLWVTVHVSDDEAADIWLKEM
GVSAERFSRLDEDNFWQMGDTGPCGPSSEIFYDHGADVPGGPPGSADEDLDRYIEIWNLV
FMQYDRQPDGELQPLPKPSVDTGMGLERIAAVLQGVHSNYEIDLFQALLQAAAKATGCTD
LEEKSLRVIADHIRSASFLICDGVIPSNEGRGYVLRRIIRRALRHGHKLGQDKPFFSTLV
AALVAEMGEAYPELGREQARIEKALLAEEEQFGRTLAAGMKVLESAIEQLDGRVLPGDVL
FNLYDTHGFPPDLTADVARERDLSVDMDGFEAAMAAQRERARGAGSFANDYSDRLNIDAI
TDFSGYEKLADDNTVVALYKDGAAVDTLNAGEEGMVVLDRTPFYAESGGQVGDTGALIAD
EARFMVTDTRKRQAAHVHVGKQVSGSLTIGGKVSACVDVDRRLAVMRNHSATHLMHAALR
NVLGEHVQQKGSLVSADYLRFDFSHGEAVSEAQREEIEILVNRQILANTAVTTELMDIES
AREAGAMALFGEKYDDQVRVLSMGSDGFSKELCGGTHVNRTGDIGLFRITLEASAAAGVR
RIEAVTGEHALAVMRRQERALSEIAATVKSSLDNAADRVRSQAQKVRELEKEIERLKQKL
ASGAGGDLTSEVQDINGVKVLATQIDGADGKTLRVTMDKLKDKLGSAVIVLAAVEGEKVA
LVAGVTKDLTTKYKAGDLLKFVAEQVDGRGGGRPDMAQGGGNNPAALPGALESVKAWVAE

NT seq 2703 nt +upstreamnt +downstreamnt
ttgttgccgcttggggtttgttgcttcaggttaacttgtcaccatcgcaaccacgccttg
agggcggtatactcggcgcctctgaccgccagccaagaaaacgtttctcttatgaaaagt
gctgaattacgccaggcctttctggactattttgccagccaggggcacaccaaggtgtcg
tcctcctcactggtacctgctaatgacccgacactgttgtttactaacgcgggcatgaac
cagttcaaggatgtttttctgggacgtgagtcccgggattacacgcgtgctacaagctcc
cagcgctgtgtccgcgccggcggtaagcacaatgacctggaaaacgtgggttatacggcg
cggcatcacaccttcttcgagatgctgggcaacttcagcttcggggactatttcaagcgc
gaagcgatcaagtttgcctgggagttcctcactggcaccttggggctaccggaagagcgg
ctgtgggttactgtgcatgtttccgacgatgaagccgctgatatctggctaaaagaaatg
ggagtcagtgccgagcgcttttcacggttggacgaagacaatttttggcaaatgggcgat
accggcccatgcggcccgagctctgaaattttttatgatcacggcgccgatgtgcccggt
ggcccaccgggttctgcagatgaggatctggatcgctatatcgagatatggaacctggtg
ttcatgcagtatgaccgccagccagatggggaactgcagcctctgcctaagcccagtgtt
gataccggcatgggcctggagcgcattgccgcagtgctgcagggcgtacattccaactac
gagatcgatctgtttcaggcattgttgcaagctgcggccaaggccacgggctgtactgat
ctggaagagaaatcactgcgcgtgatcgcagaccatattcgttcagccagttttttgatt
tgtgatggggtgattccttccaacgaaggtcgtggctatgtattgcgccgcatcattcgt
cgcgccctgcgtcatggccacaagctagggcaggacaaaccgttcttttccaccttggtg
gccgcactggtggcggagatgggtgaggcctacccggagctgggccgggaacaggcgaga
attgaaaaggccctactggcggaagaagagcaatttggccgcactttggctgcgggcatg
aaagtactggaaagtgccattgagcagcttgatggtagggtgttgcccggtgacgtgctg
tttaacctctacgatacccatggctttccaccggatctgaccgcggatgtagcccgtgag
cgcgatttgagcgtggatatggacgggtttgaggccgccatggctgcccagcgagagcgg
gcccgtggtgccggtagctttgccaatgattacagcgatcgcctgaatatcgatgcgata
accgatttttccggttacgagaaattggccgatgacaatacggtggttgctttatacaag
gacggcgccgctgtggacaccctcaatgccggcgaagaaggcatggtggtgctggatcgt
acgccgttctatgcggaatctggtgggcaggtgggtgataccggtgctctaattgcggat
gaagcccgcttcatggtcaccgatacccgtaagcgtcaggcagcacatgtgcatgtgggc
aagcaggtaagcggcagcttgaccattggtggcaaggtgtcggcctgtgtggatgtggat
cgtcgtcttgcggtgatgcgtaatcattccgcaacccaccttatgcacgccgccctgcgt
aacgtgttgggcgagcatgtacagcagaaaggatcgttagtatcggcggactatctgcgg
tttgatttctcccatggagaagcggtcagcgaagcccagcgtgaagagattgaaattctg
gtgaatcgtcagatcctcgctaacactgcggtaactacggagttgatggatattgagtcc
gcccgtgaagccggtgccatggcactgtttggtgagaaatacgatgatcaggtgcgtgtg
ctgagtatgggcagtgacggtttttccaaagaattgtgtggcggcacccacgtaaaccgc
accggtgatattggattattccgcattactctggaagcctccgcagcggcaggtgtgcgg
cgtattgaagcggtcaccggtgagcatgcgctagcggtgatgcgccgacaggagcgcgcg
ctcagcgagattgcggccacggtgaaaagctcgctggataatgctgctgatcgcgtgcgt
agccaggcacagaaagtccgtgaactggaaaaagagatcgagcgtctcaagcagaaattg
gccagcggcgccggtggtgacttgaccagtgaagtacaggatattaatggtgtgaaggtg
ttggcgacgcagattgatggtgccgatggtaaaaccttgcgggtcactatggacaagctg
aaagacaagttgggttccgcggtgattgtgttggcagcagtggaaggcgaaaaagtggct
ttggtggccggtgttactaaggacctgaccaccaaatacaaagcgggtgatctgctcaag
ttcgtggccgaacaagttgatggtcgcggcggtggtcgcccggacatggcccagggtggc
ggtaataatcccgctgcgctgcccggggcgctggaaagtgtaaaggcctgggtggccgag
tag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (8)   
   PROSITE (1)   
All databases (20)

DBGET integrated database retrieval system