KEGG   Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT101423
Entry
AGABI1DRAFT101423 CDS       T03136                                 
Symbol
AGABI1DRAFT_101423
Name
(RefSeq) hypothetical protein
  KO
K11600  exosome complex component RRP41
Organism
abp  Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AGABI1DRAFT101423 (AGABI1DRAFT_101423)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abp03019]
    AGABI1DRAFT101423 (AGABI1DRAFT_101423)
Messenger RNA biogenesis [BR:abp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     AGABI1DRAFT101423 (AGABI1DRAFT_101423)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     AGABI1DRAFT101423 (AGABI1DRAFT_101423)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 18821807
NCBI-ProteinID: XP_007331478
JGI: Agabi_varbur_1_101423
UniProt: K5WS10
Position
Unknown
AA seq 260 aa
MSSRVEILNDGGYRSDGRRQFELREVTINLAQQGHADGSAIITHGLTQVLVSVFGPREAK
MRSQTIHDRANINVDVNVAAFSAGERRKRSRGDKRILEIASTLKSTFEPVVQTTLYPRSQ
IDVYVTVLQQDGGLLQTCINGTTLALINAGIPMLDFVCAVTGGVHSTSPLLDLTTLEEND
VPHVTVAIMPKTGKVALVTMETRLHVDRFEEIFRLAGEAGKVLHREMKSAVMGRTSALVD
AMGSQGTGIDRDGDEPMNTA
NT seq 783 nt   +upstreamnt  +downstreamnt
atgagctcacgagttgaaatactcaacgacgggggctatcgttcagacggcagacgccag
tttgaattgcgagaagtgacgatcaacctcgctcaacaaggacacgcggatggttctgct
ataatcactcatggcctcactcaagttctcgtctcggtctttggacctagagaagcgaaa
atgcgctctcaaaccatacatgaccgcgccaatatcaatgttgacgtgaatgtcgcggct
tttagtgcgggtgagcggcgaaagcggtctcgcggagacaaacgaatactcgagattgct
tcgacactcaaatcgacgtttgaaccagtggttcagaccacactttatcctcggtcgcag
atcgatgtgtatgttactgtactgcagcaagatggtggactactacaaacatgcattaat
ggaacgacactggcactgatcaacgcgggcatcccaatgctggattttgtgtgtgcggtc
accggaggggtgcactcgacatcccctttgctagatcttacaactttggaggagaacgac
gtgccgcatgtgacggtggcaataatgcccaagacggggaaagtagcgcttgtgacaatg
gagacgcgtctacatgtggaccggtttgaggagattttcagattggcgggggaagcaggg
aaggtgctgcatagggaaatgaagagcgcagtaatggggcggactagtgcgttggtagat
gcaatggggagccaaggtactggtatagatagggacggggacgagcccatgaatacagca
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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