KEGG   Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT114282
Entry
AGABI1DRAFT114282 CDS       T03136                                 
Symbol
AGABI1DRAFT_114282
Name
(RefSeq) hypothetical protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
abp  Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03020  RNA polymerase
abp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:abp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AGABI1DRAFT114282 (AGABI1DRAFT_114282)
  09124 Replication and repair
   03420 Nucleotide excision repair
    AGABI1DRAFT114282 (AGABI1DRAFT_114282)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abp03021]
    AGABI1DRAFT114282 (AGABI1DRAFT_114282)
   03400 DNA repair and recombination proteins [BR:abp03400]
    AGABI1DRAFT114282 (AGABI1DRAFT_114282)
Transcription machinery [BR:abp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     AGABI1DRAFT114282 (AGABI1DRAFT_114282)
  RNA polymerase III system
   RNA polymerase III
     AGABI1DRAFT114282 (AGABI1DRAFT_114282)
  RNA polymerase I system
   RNA polymerase I
     AGABI1DRAFT114282 (AGABI1DRAFT_114282)
DNA repair and recombination proteins [BR:abp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      AGABI1DRAFT114282 (AGABI1DRAFT_114282)
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat
Other DBs
NCBI-GeneID: 18824270
NCBI-ProteinID: XP_007330507
JGI: Agabi_varbur_1_114282
UniProt: K5WTE2
Position
Unknown
AA seq 208 aa
MGDVDETAKLWKVNRTIHELVRDRGFLVSDEEIHMDLQHFRDQYANNSGMVDRNQLNFYT
TSRANPTDQIFVYFTDERSVGVKTMRKLLSILEEKSIQRGIIVFPGNMTPSARKVIVAMS
AQYRLEEFSEADLLVNIVHHTLVPRHEVLTPEEKKVLLEKYRLKETQLPRIQLADPVARY
YGLRRGQVVKITRPSETSGRYASYRICF
NT seq 629 nt   +upstreamnt  +downstreamnt
ccatgggcgacgtcgacgaaactgcaaagctatggaaagtcaacaggacaattcatgagc
tggtcagagacagaggatttctggtgtcagacgaagaaattcatatggacctacagcatt
ttcgcgatcagtacgccaataatagcggcatggtagaccgcaaccagcttaacttttaca
ccacctctcgagcgaatccaacagatcagatcttcgtgtactttactgacgaaagaagcg
tcggtgtcaagacaatgcgaaagcttcttagcatcctcgaggaaaagtcaattcagcgag
gcatcattgttttcccggggaacatgactccttcagcccgcaaagttatagttgcaatgt
ctgcacagtaccggctggaagaattctcggaagctgatctcctcgtcaacatagtccatc
atactttggtgccacgacacgaggtccttacaccagaggagaaaaaggttttactcgaaa
agtaccgtctcaaagaaactcaattaccgcgtattcaattagcggatccagtggcgcggt
attatggcttgcggcgtggtcaagtggtcaaaattacaagaccaagcgaaacgagcggcc
gatatgcaagttatcggatatgcttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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