KEGG   Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT74231
Entry
AGABI1DRAFT74231  CDS       T03136                                 
Symbol
AGABI1DRAFT_74231
Name
(RefSeq) hypothetical protein
  KO
K03681  exosome complex component RRP40
Organism
abp  Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AGABI1DRAFT74231 (AGABI1DRAFT_74231)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abp03019]
    AGABI1DRAFT74231 (AGABI1DRAFT_74231)
Messenger RNA biogenesis [BR:abp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     AGABI1DRAFT74231 (AGABI1DRAFT_74231)
SSDB
Motif
Pfam: RRP40_S1 KH_6 Rrp40_N RRP4_S1 Levi_coat
Other DBs
NCBI-GeneID: 18831169
NCBI-ProteinID: XP_007329772
JGI: Agabi_varbur_1_74231
UniProt: K5VXU7
Position
Unknown
AA seq 231 aa
MTTVVPGEKIDAQHVNLKLGPGLQQISSNGPSQSKIISTRAGAVNHSANGSRWWIESNSR
RYVPALQESVVGAIVQRQGEGYRVDIGSAHSATLDGLAFESATKRNKPNLKVGCLVYARV
SLAHKDMDPELECFDAQTHKSEGFGELKGGFVVKCSLKMCRDLLDPKHFLLPLLGSRFPF
ETAVGMNGRVWINAKQPGQVIAIARCIEAADPDGGGMELKAIKVFLDTLDI
NT seq 696 nt   +upstreamnt  +downstreamnt
atgaccacagtcgtccccggcgaaaaaatcgacgcacaacatgtcaatttgaaacttggc
ccgggattgcagcagatatcttccaatggaccatcacaatcgaagataatatcaacccgg
gcaggcgccgtaaaccattctgcaaatgggagtagatggtggattgagagtaattcaagg
cgctacgttcctgccctccaggaatcggtggttggtgctattgtacagagacaaggagaa
ggctatcgagttgatattggatcagcgcattctgctactctggatggactagcctttgaa
agcgcaacaaaaagaaataagcccaatctcaaggtcggatgcctagtatatgcacgcgtg
tcattggcacacaaggacatggatcctgagctagaatgttttgacgcacaaacccacaag
tcagaaggattcggagaactcaagggcggctttgtggtaaaatgcagtttgaaaatgtgc
agagatcttttggatccaaaacactttttgcttcctctactgggtagcagatttcccttt
gagactgctgtcggtatgaacggccgcgtatggatcaatgcgaaacaaccggggcaagtc
attgcaattgcgcgatgcatagaagctgctgatcctgatggtggaggtatggaactgaaa
gcaatcaaagtgtttcttgatacgctggatatctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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