KEGG   Paracholeplasma brassicae: BN85309750
Entry
BN85309750        CDS       T03095                                 
Symbol
rumA
Name
(GenBank) 23S rRNA (Uracil-5-)-methyltransferase RumA
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
abra  Paracholeplasma brassicae
Brite
KEGG Orthology (KO) [BR:abra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:abra03009]
    BN85309750 (rumA)
Enzymes [BR:abra01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     BN85309750 (rumA)
Ribosome biogenesis [BR:abra03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BN85309750 (rumA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Met_10 Cons_hypoth95 Methyltransf_15 RrnaAD MTS Methyltransf_31 Methyltransf_25 N6_N4_Mtase Methyltransf_4 Methyltr_RsmB-F TRM PrmA Methyltransf_11 Ubie_methyltran Methyltransf_12 PCMT UPF0020
Other DBs
NCBI-ProteinID: CCV65996
UniProt: U4KNX9
Position
complement(1068913..1070241)
AA seq 442 aa
MSVKLVCSRVDEQGYGIVYYNDQAYKVSNLLEGEEAEVELFSQSGKVVSLIKKSPDRVKP
VCGVYHLCGGCQLQHIRYEHQLDLKHDYVKNCFKEVNLDVPVLKPIGMNDPYHYRNKLQI
VFSEKKKKIVAGFYEENTHKVVNAEDCDIQDQVGNEIIKTFKQLMAKHKIKPYLEAKDEG
LIKHVLVKRSQVTKEVLVVIVTRDLVFPGRNNILKDLRQKHPEITSVVQNINPRRTSVVL
GNEEKVIFGKGYIEDVLLGHRFQIGSKTFYQVNPKQTEVLYQKAIELLNLSKNDVVLDAY
AGVGTIGISLAKQAKEVLCVEINPDSVKNAKKNAHINQINNIDFVCEDASKYITYMVNQK
VKLDAIVVDPPRSGLEKAFVDALNQIKVKKLVYISCDPKTLSRDLKQLSYKYDIHPVQPV
DMFSQTYHIENVVLLTAKKQVQ
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgagtgtaaaattagtttgtagccgcgtggatgaacaaggttacggcattgtctattat
aacgatcaagcgtataaagtatcaaacctacttgagggtgaagaagcggaagtcgaacta
ttcagtcaatcaggcaaagtggtttctttaatcaaaaagagcccagatcgtgtgaaacca
gtttgcggggtataccatttgtgtggggggtgtcaactccagcacatccgatacgaacac
caactcgatttaaagcatgactacgttaaaaattgtttcaaagaagttaatcttgatgta
ccagtgttaaaaccaatcggcatgaatgatccatatcactatcgtaataagctgcaaatt
gttttttctgagaaaaagaaaaaaatcgttgcaggtttttatgaagaaaatacacataaa
gtcgtcaatgctgaggattgtgatattcaagaccaagtcggtaatgaaatcatcaagaca
tttaaacagttaatggcaaaacataaaatcaaaccttacttagaagccaaagatgagggt
ttaattaaacacgttttagtcaaacgaagtcaagttaccaaagaagtactcgttgttatt
gtcacgagggatttggtatttcctggaagaaataacattttaaaagatcttagacaaaag
catcctgagatcacttcggtcgtacaaaatatcaatccaagaagaacctcagtcgttcta
ggcaatgaagaaaaagttatttttggcaagggttacattgaggatgtcttactcggacac
cgattccaaataggctcaaaaacattttatcaagtgaatccaaaacaaaccgaagtactc
tatcaaaaagcaattgagctactaaatctatcaaaaaatgatgtggttttagatgcttac
gccggtgttgggaccattggtatctcacttgctaagcaagcaaaagaggttctttgtgtc
gaaattaaccctgattcggtaaaaaatgctaaaaaaaatgcacacatcaaccaaatcaat
aacattgatttcgtttgcgaagacgcatctaaatacatcacgtacatggtaaatcaaaag
gttaagcttgatgcgattgtcgtcgatccaccacgatctggtctagaaaaagcatttgtt
gatgcgttaaatcaaattaaggtaaagaagttagtatatatctcttgtgatccaaagaca
ctatcacgagatttaaaacaacttagttataaatacgacattcacccagttcaaccagtc
gatatgttttcacaaacgtatcacattgaaaatgttgttttattaactgcgaaaaaacaa
gttcagtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (60)   

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