KEGG   Azospirillum baldaniorum Sp245: AZOBR_10306
Entry
AZOBR_10306       CDS       T02152                                 
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
abs  Azospirillum baldaniorum Sp245
Pathway
abs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AZOBR_10306 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abs03019]
    AZOBR_10306 (pnp)
   03016 Transfer RNA biogenesis [BR:abs03016]
    AZOBR_10306 (pnp)
Enzymes [BR:abs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     AZOBR_10306 (pnp)
Messenger RNA biogenesis [BR:abs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AZOBR_10306 (pnp)
Transfer RNA biogenesis [BR:abs03016]
 Prokaryotic type
  tRNA degradation factors
   AZOBR_10306 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 KH_2
Other DBs
NCBI-ProteinID: CCC96519
UniProt: A0A9P1JN03
Position
complement(286680..288800)
AA seq 706 aa
MFKVFRKEIEWGGRKLTFETGKIARQADGAVLVTYGETTVLCTVVGAKSPKPGVDFFPLT
VNYQEKSFAAGKIPGGFFKREGRPTEKETLVSRLIDRPIRPLFADGFRNETQVICTVLSH
DLENDPDIVAMVGTSAALTISGIPFLGPIGAARVGYVDGQYVLNPTMDAVDGSALDLVVA
GTQEGVLMVESEAKELSEEVMLGAVMFGHSGFQPVINAIIDLAEECAKEPWDLPEPAYDR
AALKAKLRATVGADVEAAYTETVKQVRYEKIGAAKAKALEALAEAHETQAIVTEFKELEA
DILRGAVLKTGRRIDGRDTKTVRPIVSEVGVLPRAHGSALFTRGETQALVVTTLGTSQDE
QIIDALQGEYREHFMLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIHPLLPKKEDFP
YTLRVVSEVTESNGSSSMATVCGTSLSLMDAGAPLARPVAGIAMGLIKEDDGFAVLSDIL
GDEDHLGDMDFKVAGTDAGITALQMDIKITSITEEIMKIALGQAKDGRLHILGEMSKALT
GAREAVNENAPRITVINIPKEKIRDVIGSGGKVIREIVEQTGAKIDIEDDGTVKVAAVDT
KAAQAAIDWIKGIVAEPEMNVVYTGKVVKVVDFGAFVNFLGSRDGLVHISELAQQRVGKV
SDVVSQGDSVKVKVIGFDDRGKVKLSMKQVDQATGEDLTKKDGPAA
NT seq 2121 nt   +upstreamnt  +downstreamnt
atgttcaaagttttccgcaaagaaatcgaatggggtggacgcaagctgacgttcgagacg
ggcaagatcgctcgtcaggccgacggcgcggtgctggtcacctatggtgagaccacggtc
ctctgcacggtcgtcggcgccaagtcgccgaagccgggcgtcgatttctttccgctgacg
gtcaattaccaggaaaagtccttcgcagccggcaagattcccggcggcttcttcaagcgt
gaaggccgcccgacggagaaggagacgctggtcagccgcctgatcgaccgtcccatccgt
ccgctgttcgccgatggcttccgcaacgagacgcaggtcatctgcaccgtgctgagccac
gatctggagaacgatccggacatcgtcgcgatggtcggcacctcggccgcgctgacgatc
tccggcatcccgttcctcggtccgatcggtgctgcccgcgtcggctacgtcgacggccag
tatgtgctgaacccgaccatggacgccgttgacggttccgcgctcgacctcgtggtcgcc
ggtacccaggaaggcgtgctgatggtcgaatcggaagccaaggagctgtccgaggaggtc
atgctgggcgccgtgatgttcggtcacagcggcttccagccggtcatcaacgccatcatc
gatctggccgaagagtgcgccaaggagccgtgggacctgccggagccggcctacgaccgc
gccgccctgaaggcgaagctgcgcgcgaccgtcggcgccgacgtggaggccgcctacacc
gagacggtcaagcaggtccgctacgagaagatcggcgccgccaaggcgaaggcgctggag
gctctggccgaggcccacgagacccaggccatcgtgaccgagttcaaggagctggaggcc
gacatcctgcgcggcgccgtcctgaagaccggccgccgcatcgacggccgcgacaccaag
acggtccgcccgatcgtgtcggaggtcggcgtgctgccgcgcgcccacggttcggcgctg
ttcacccgcggcgagacccaggcgctggtcgtcaccacgctgggcaccagccaggacgaa
cagatcatcgacgcgctgcagggcgagtaccgggagcacttcatgctccactacaacttc
cctccgtactcggtgggcgaggccggccgcatgggctcgccgggccgccgcgagatcggc
cacggcaagctggcgtggcgcgccatccacccgctgctgccgaagaaggaagacttcccc
tacacgctgcgcgtggtgtcggaagtgaccgagtccaacggctcgtcgtcgatggcgacg
gtctgcggcacctcgctgtcgctgatggacgccggcgccccgctggcgcgtccggtggcc
ggcatcgccatgggcctgatcaaggaagacgacggcttcgcggtcctgtcggacatcctg
ggtgacgaggatcacctgggcgacatggacttcaaggtggccggcaccgacgcgggcatc
accgcgctccagatggacatcaagatcacctcgatcaccgaggagatcatgaagatcgcc
ctgggccaggccaaggacggccggctgcacatcctgggcgagatgtccaaggcgctgacc
ggcgcccgcgaggcggtgaacgagaacgccccgcgcatcaccgtgatcaacatcccgaag
gagaagatccgcgacgtgatcggctccggcggcaaggtgatccgcgagatcgtggagcag
accggcgccaagatcgacatcgaggacgacggcacggtcaaggtcgccgcggtggacacc
aaggccgcccaggccgccattgactggatcaagggcatcgtcgccgagccggaaatgaac
gtggtctacaccggcaaggtcgtgaaggtcgtcgatttcggcgccttcgtgaacttcctg
ggctcgcgcgacggcctcgtccatatttccgagctggcgcagcagcgcgtcggcaaggtg
tcggacgtcgtgtcgcagggcgattcggtgaaggtgaaggtcatcggcttcgacgaccgc
ggcaaggtgaagctgtcgatgaagcaggtcgaccaggccaccggcgaagacctgaccaag
aaggacggccccgccgcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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