KEGG   Aliarcobacter butzleri RM4018: Abu_1020
Entry
Abu_1020          CDS       T00600                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha chain
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
abu  Aliarcobacter butzleri RM4018
Pathway
abu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:abu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Abu_1020 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abu03021]
    Abu_1020 (rpoA)
   03400 DNA repair and recombination proteins [BR:abu03400]
    Abu_1020 (rpoA)
Enzymes [BR:abu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Abu_1020 (rpoA)
Transcription machinery [BR:abu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Abu_1020 (rpoA)
DNA repair and recombination proteins [BR:abu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Abu_1020 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_CTD RNA_pol_A_bac RNA_pol_L RNA_pol_L_2
Other DBs
NCBI-ProteinID: ABV67280
UniProt: A8ETK6
Position
1021160..1022158
AA seq 332 aa
MKKFAETPFLPTEVEIEAISDNEAKISAYPFEDGFAITLAHPLRRLLLSSSVGCAPIAVK
IEGASHEFDSLRGMLEDVAIFVINLKNIKFKINGDKEQVVVEYSFNGPRDIKGEDLINSE
VDVVSKDAHLATINSDCNLTFSVILQKGIGYMPSEDIRDIVGADYIPIDAFFTPVKKVVY
DIEKMLVEDNPNYEKAVFRVQTNGQISPVTAFKEAVSVMYSQMSVFNKVFDLSEVAVSDS
GEEPVELKELVIRIDDLNLSARSFNSLDRAGLKYLGELVLMSEVEVKNIKNLGKKSYDEI
AEKLESLGYPVENTLPENVASALRRKLEQLKA
NT seq 999 nt   +upstreamnt  +downstreamnt
atgaaaaagtttgcagaaactccgtttttaccaacagaagttgaaatagaagctatcagt
gataatgaggctaaaatatcagcatatccatttgaggatggttttgcaattactttagcc
caccctttgagaagattacttctaagttcatcagttggttgtgcgccaattgctgtaaaa
attgagggtgcttctcatgagtttgactcattaagaggtatgttagaagatgtagctatt
tttgttataaatttaaaaaacattaaatttaaaataaatggtgacaaagaacaagttgtt
gttgaatattcatttaatggaccaagagatattaaaggtgaagatttaattaactctgaa
gttgatgttgtttcaaaagatgcacatttagcaacaattaatagtgattgtaatttaaca
ttttctgtaattcttcaaaaaggtataggatatatgccaagcgaagacattagagatatt
gttggagctgattatattccaattgacgctttttttacacctgttaaaaaagtagtttat
gatatagaaaaaatgttagttgaagataatcctaactatgaaaaagctgtatttagagta
caaacaaatggacaaatttctccagtgactgcatttaaagaagcagtttctgttatgtat
tctcaaatgtcagtgtttaacaaagtttttgatttatctgaagtagcagtaagtgattct
ggtgaagaaccagttgaattgaaagaattagttataagaattgatgatttaaatttaagt
gctagaagtttcaactctttagatagagctggactaaaatacttaggtgaattagtactt
atgagtgaagttgaagtaaaaaatattaaaaatcttgggaaaaaatcttatgatgaaata
gctgaaaagttagaatcattaggatacccagttgaaaatacacttccagaaaatgttgct
tctgcattaagaagaaaattagagcaactaaaagcataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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