KEGG T00868: ACP

Acidobacterium capsulatum: ACP_3506

Entry

ACP_3506 CDS T00868

Definition

DNA ligase, ATP-dependent

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

aca Acidobacterium capsulatum

Pathway

aca03410	Base excision repair
aca03420	Nucleotide excision repair
aca03430	Mismatch repair
aca03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:aca03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:aca03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:aca03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:aca03450]

SSDB

Motif

Pfam:

LigD_N DNA_ligase_A_C DNA_ligase_A_M DNA_primase_S DUF4604 NdhM mRNA_cap_enzyme

Other DBs

NCBI-GI:

225875041

NCBI-GeneID:

7698868

UniProt:

C1F736

Position

4075693..4078284

AA seq 863 aa
MRDFGVTPEPKGAAGKRLNAGALSFVVQKHAASHLHYDFRLEWQGVLKSWAVAKGPSYYP
GDKRLAVEVEDHPLAYGGFEGIIPQGQYGGGTVMLWDRGTWEPLGDAARQLRDGNLKFRL
HGEKLKGCWALVRMKGKFAGRSKPSWLLIKEHDESERGDDAPAIVDEAPLSVVSGRDMQQ
IAEAQDAVWNAKGAQAQSSAAAHRANAPKQSMPAALLPREIAATLKRLPSEALPRFVPPQ
LATLVSEPGAGENRVYEIKLDGYRIEARVDKKADPPVQLLTRTGLDWTSRMRPLADALLR
LPVQTALLDGELVVLEEKGTTSFAKLQAVLKDDSRHSLTYFAFDLLHLDGHNLRGEPLLI
RKKILSALLTDLPASSAVRFSEHVKGNGEEIFQKACKLGAEGVISKLAQGFYHSGRSRDW
WKLKCYLEQELVIGGYTLPSNGTYGVGALLLGYYDAGKLIYAGRTGTGFTRATHRRMREQ
LEAIRRGTAPFAKVEQDARRGAIWVQPQLVAQVSFASWTTDGLVRQAAFKGLREDKPAKT
VRREGGQMPESEGKAAKKPRANSTTVRSELRLTHRDKVLDKDSGLTKEALADYYARIAPF
MLPHIQGRAVSIVRCPAGSDLSCFFQKHNNHTLPGEIESIEIASRKTGKVEPFLTISSAN
DLLVLAQASVLEIHAWGSTRDSLEKPDRLTIDLDPDDAIDWKTLAGAAVEVRKRLARAGV
KSFLKSTGGKGLHVVAPIEPEHEWPEVKEFAHRMVLEMEKENPDLYLTRMTKAARKGKIY
LDYLRNERGATAIAPFSPRARPGAPVALPLRWSELKSAERPIFRVTEFDGWRKRLKADPW
RGFLQLHQSLRLPEAARVSPGGR

NT seq 2592 nt +upstreamnt +downstreamnt
atgagagattttggcgtgacgcccgagccaaagggcgcggcggggaagcgtttgaacgcg
ggcgcgttgagctttgtggtgcaaaagcatgcggccagtcatctgcattacgacttccgc
ctggagtggcagggagtgctcaagagctgggcggttgcgaaggggccaagttattatccc
ggcgacaagcggctcgccgtcgaggtcgaagaccatccgttagcctatggtggattcgag
ggcatcattcctcagggccagtacggcggcggcaccgtgatgctgtgggatcgcggcacc
tgggagccactgggtgatgcggcccgccagttgcgcgatggcaatctgaagtttcgattg
catggcgagaagctgaaaggctgctgggcgctggtgcgcatgaaagggaagtttgcgggg
cgatcgaagccgtcatggttgctgatcaaggagcacgacgaatccgaacgcggcgacgat
gcgccggccattgtggacgaagctccgctcagcgtagtgagtggccgggacatgcagcag
atcgccgaggctcaggatgccgtgtggaatgcgaagggcgcgcaggcgcaaagctccgcc
gctgcgcatcgtgccaatgccccgaagcaatccatgcccgccgcactccttccgcgcgaa
atagcggctactctcaagcgcttgcccagcgaggcgttgccgcggtttgtgcctccacaa
cttgcgacgctcgtgagcgagccgggggctggtgagaatcgcgtctacgaaatcaagctc
gatggctatcgcatcgaggcgcgcgtggacaagaaggccgatccgccggtgcagcttctc
acgcgcacgggccttgactggacgagccggatgcggccgttggccgatgctctgctgcgg
ctgccggtgcagaccgccttgctcgacggcgaactggtggtgctcgaagagaagggaacg
accagcttcgccaaattacaggcagtactgaaggatgactcccggcattcactcacatac
tttgcctttgacctgctgcatctggatgggcataatctgcgcggcgaaccattgctcatt
cgtaagaagatactcagcgcactgttgactgatttgcccgcaagcagcgcggtgcgcttc
agcgagcacgtgaaaggcaatggcgaggagatatttcaaaaggcctgcaaactcggcgcg
gaaggggtcatttcaaagctcgcgcagggcttttaccactccggccggagccgcgactgg
tggaagctcaagtgctatctcgaacaggaactggtcatcggcggatacacgctcccttcc
aacggcacctatggggtgggcgcattgctgctgggctattacgacgccggcaagctgatc
tacgcgggccgcacgggaacaggtttcacgcgcgccacgcatcgccgcatgcgagagcag
ttggaggccattcgccggggaactgcgccatttgcaaaggtggagcaggatgcgcggcgc
ggggccatctgggtgcagccgcagctcgtggcccaggtttcattcgcaagctggacgacc
gatggtctcgtccggcaggctgccttcaaggggttgcgtgaagacaagccggcaaagact
gtgcggcgcgaagggggacagatgccagaatcggaaggaaaggcggcgaagaaacctcgc
gcgaacagcaccacggtgcggtcagagcttcggctcacccatcgcgacaaagtgctcgac
aaggattcgggcctgaccaaagaggcgctcgcggactattacgccaggatcgcgcccttc
atgctgccgcacattcaagggcgtgcggtgtcgattgtgcgctgtcctgcgggcagtgac
ctgagttgcttctttcagaagcacaacaaccacacgctgcccggcgagatcgaaagcatt
gagattgcgagccgcaaaaccggcaaggttgagcccttcctcaccatctcaagcgcaaac
gatttgctggtactcgcgcaagccagcgtgcttgagattcatgcctggggttcgacgcgc
gactctctggaaaagccggaccgtctgacgatcgaccttgaccctgacgatgccatcgac
tggaagacgctggccggcgcggctgtggaggtgcgcaagcggctcgcacgcgcgggggtg
aaatcattcctcaagagcaccggcggcaagggccttcatgtcgtggcccccatcgagccc
gaacatgagtggcccgaggtcaaagagtttgcccatcgcatggtgctggagatggagaag
gaaaatcctgacctctatctcacgcgaatgaccaaggccgcccgcaaaggcaaaatctac
ctggattatctccgcaacgaacggggcgcgacggccatcgcgccgttctctccgcgagcg
cgcccgggagcgcccgtagcgctgccgctgcgctggtctgagctcaagtcggcggagcgg
cccatctttcgcgtgacggaatttgacggctggcgtaagaggctcaaggctgatccatgg
cgcggctttctgcagctgcatcagagtttgcgtctgcctgaggccgcccgggtgagtcca
ggaggaagatag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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