KEGG   Atta cephalotes (leaf cutting ant): 105617675
Entry
105617675         CDS       T04923                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
acep  Atta cephalotes (leaf cutting ant)
Pathway
acep03018  RNA degradation
acep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105617675
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105617675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acep03019]
    105617675
   03041 Spliceosome [BR:acep03041]
    105617675
Messenger RNA biogenesis [BR:acep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105617675
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105617675
Spliceosome [BR:acep03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105617675
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 105617675
NCBI-ProteinID: XP_012054620
UniProt: A0A158NAR2
Position
Unknown
AA seq 162 aa
MNERQGLTYNETVSENADEESNKGLPLTLLKTAQNHPMLVELKNGETYNGHLVSCDNWMN
INLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEVIDMVKEDIQMKSRGRGEMKGRG
QNQRGRGGGRGTFGRGGRGPAPLGRGGSTQVGNKSQNKPRPK
NT seq 489 nt   +upstreamnt  +downstreamnt
atgaacgagcgacaaggacttacgtataacgagactgtctctgagaatgccgacgaggaa
agcaacaaaggattacctctaactttactaaaaacagcgcaaaatcaccccatgttggtg
gagctgaaaaatggggaaacttacaacggtcatttggtcagctgcgataactggatgaac
ataaacctcagagaggttatatgtacatcaagggatggtgacaaattctggagaatgcct
gaatgctatataagaggcagcacaataaaatatctgaggatcccagatgaagtaatagat
atggtaaaagaagatatacagatgaaatcaaggggacgcggcgaaatgaagggtcgaggt
cagaatcaaagaggacgtggtggtggaagaggtacctttggcagaggaggaagaggtcca
gcaccattgggtcgtgggggtagtacacaagtcggaaataaatcacaaaataaaccaaga
cctaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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