KEGG   Atta cephalotes (leaf cutting ant): 105622127
Entry
105622127         CDS       T04923                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
acep  Atta cephalotes (leaf cutting ant)
Pathway
acep03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:acep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    105622127
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acep03021]
    105622127
   03036 Chromosome and associated proteins [BR:acep03036]
    105622127
Transcription machinery [BR:acep03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     105622127
   Coactivators
    SAGA/TFTC/STAGA complex
     105622127
Chromosome and associated proteins [BR:acep03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     105622127
    STAGA complex
     105622127
    TFTC complex
     105622127
    SAGA complex
     105622127
    SLIK complex
     105622127
SSDB
Motif
Pfam: WD40 TFIID_NTD2 ANAPC4_WD40 NBCH_WD40 WD40_like RMC1_N Nup160 DUF6452 eIF2A Cytochrom_D1 CTLH
Other DBs
NCBI-GeneID: 105622127
NCBI-ProteinID: XP_012058950
UniProt: A0A158NN42
Position
Unknown
AA seq 589 aa
MKMKRMKSEVISATIESYLKRRHYQTHDYRKGDQLFCQNSDQTTLNATAECGTSQDNSIV
FSAITIDIAAADQAYQRLKKWMSVVLNEKLRIELQGLLYPIFCHLYLEMLHAGNRQAAIQ
FLKTHQNEFMSDTEKDFLEELSSVFSVQDIELRPLVNAFRTRKYKVDLSESAHICLRQYL
TKYGHIILMQIINTHITIIRKTGSLHQMDGEVPEEKSQRYETSINGHVEQPSGTGVDREM
RELQEAIRLIQHNSHQALRLFTVKNAIENASCGLIAPKMDKLAVGFSTAEIRLWAIGDTV
LVKKNDKQTYVSSTCDISPFYKFNEQESTVRSEAGAIILRGHTDVVHDLRFIPEIDILLS
VSSDKDMRAWKLNNYSCTAIYSGHSYPIWCMDTSVFNLYIGTGSHDRTAKLWSLDRTFPL
RIFAGHFLDVNCIKFHPNARYLATGSADKTVRLWSKDDGNLLRVYVGAQSTIYTLAFSPD
GKYLAAAGDDKSIYIWDLATNGLLTELKGHKDTIMNVDWSLDNQYIASASLDGIVRLWPT
QDFIKTLNGGSSSAMLQSETPQIYSTYCSSILSLNYYKKSNSLICIGTK
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaagatgaagcggatgaagagcgaggtgatcagcgcaacgatcgagtcttacctaaaa
cggcgtcattatcagacccacgattatcgcaagggcgatcagttgttctgtcagaacagc
gatcagacaacgttgaacgcgaccgcggagtgcggcacctcgcaggacaactcgatcgtt
ttcagtgccattaccattgacatcgctgcggcagatcaggcatatcagcgattgaagaaa
tggatgagcgtcgtactcaacgaaaaattacgaatagaattgcaaggacttttgtatccg
atattttgtcatctttatttagagatgttacatgctggtaatcgccaagctgcaatccaa
ttcctaaagacgcatcagaatgaatttatgagtgatacagagaaagacttcttagaggaa
ttatctagtgtattttcggtgcaagacattgagctgagacctttggtaaatgcgttcaga
actagaaagtataaagtagatctgtccgagtcggcacatatttgtctgagacaatatctt
accaaatatggacacataatattaatgcagattataaatacacacatcacaataattaga
aaaacaggcagccttcatcaaatggatggagaagtacctgaagagaaaagtcaaagatat
gaaacaagtattaatggtcacgtggaacaaccatctggtactggtgtggatcgtgaaatg
agggaattgcaggaagctatacgattgatacaacataattctcatcaagcattaagatta
tttacagtgaaaaatgctatagagaatgcaagttgtggtcttattgcacctaaaatggat
aagttagctgtaggttttagtacagctgaaatacgtttatgggctataggcgatacagtc
ttggtcaagaaaaatgataagcaaacgtatgtttcgtctacctgtgatatatcaccattt
tataaattcaacgagcaagaaagcacagtaagaagtgaagcaggagccataatattaaga
ggacatacggatgtagtacacgatttaagatttattccagaaatagatattcttctttct
gtatcgagtgataaagatatgagagcatggaaactcaataattattcatgtacagcaata
tatagcggtcatagttatcctatatggtgcatggatactagtgtgtttaatttatatatc
ggcacaggctcacatgacagaactgcaaaattatggtcattggatagaacatttcccttg
agaatatttgcaggtcattttttagatgtcaattgcataaaatttcatccaaacgcaaga
tacttagcgactggttccgctgataaaactgtaagattatggtcaaaagatgatgggaat
ctattgcgagtatatgttggagcgcaatcgactatttacactttagcttttagtccagat
ggcaaatatctggctgctgcaggtgacgataaatccatatatatatgggatttagcaact
aatggtttactgactgaattgaaaggtcataaagatacaatcatgaatgtagattggagt
ttagataaccaatatatcgccagtgcaagcttagacggaatcgtacgattgtggcctact
caagatttcatcaaaacattgaatggaggatcgtcaagtgctatgttgcaatcagaaacg
ccacaaatttattcaacgtattgctcaagcattctctcattgaattattacaaaaaaagt
aattcgttaatttgtatcggtactaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (23)   

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