KEGG   Atta cephalotes (leaf cutting ant): 105627110
Entry
105627110         CDS       T04923                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
acep  Atta cephalotes (leaf cutting ant)
Pathway
acep03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105627110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acep03019]
    105627110
Messenger RNA biogenesis [BR:acep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105627110
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     105627110
SSDB
Motif
Pfam: Not3 NOT2_3_5_C FlgM PulA_N1
Other DBs
NCBI-GeneID: 105627110
NCBI-ProteinID: XP_012063782
UniProt: A0A158P1X4
Position
Unknown
AA seq 687 aa
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
KDEVTNWLANSIDALNLQMDTFESEIESLQAGKKKRIDKDKQDRVDELKAKLDKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQDPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSCTSPIPSPSLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNTQASIPTTGSTATIKSNMLSSSTPSKTIPMTPSHSSPSSTSNHIATTNAGNFAT
VAASHSNSQAIHSTSNKTSTHNSENNILSSSSTSSVTSNVPQTIAQQHNNNPAPAQTTHV
LHSQQSQNHNSETEMTTPIPPSSSPQSSVSSRSSPMPANSCSPAPSTANGLIPKLPDGSM
SSLKSIAQQVIVRAGLEIPPSEPNRNIFDSAKTSNSSNNNATSEAHIPPLLGVAPLGPVP
LQKEHQLQFQMMEAAYYHMPHPSDSERLRSYLPRNTCTTPPYYQQVQLPHSDTVEFFQRL
STETLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKIINEEYEQGTYIY
FDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq 2064 nt   +upstreamnt  +downstreamnt
atggctgcgacaagaaagttgcaaggtgaaatagatcggtgccttaaaaaagtaacggaa
ggtgtggaaacctttgaagatatttggcaaaaagttcataatgccacgaacagcaatcag
aaagaaaagtacgaggctgatctcaaaaaggaaatcaagaaacttcaaaggttacgcgat
caaattaagagctggatcgcgtcgggtgaaataaaggataagagtacgcttctggactat
cggaagttgattgagactcaaatggaaagatttaaagttgtagaaagagagacaaaaaca
aaagcttattctaaagaaggtttaggcgctgctcagaaattggacccagctcagaaggag
aaagatgaggttactaattggcttgccaattccatagacgctctcaatctgcagatggat
acatttgaatcggaaatagaatcgttacaagcgggaaagaagaaaaggatagacaaagat
aaacaagatagggtggatgaattgaaggcaaagctcgacaaacaccgctaccatatccgt
aaattggagacattattacgtatgcttgataatatgtctgtcgaagtcaatacaataaag
aggataaaggacgatgttgagtattatatcgaatcttcgcaagatcccgattttgaggaa
aacgaatatatttacgatgatattatcggccttgatgaagttgagttgtcaggagttggc
atcccctcgtcagcaacaacagatagtaacaacagcaatgaaaccggaggaacgccaacc
tcaactaattcctgtacttcgcctataccatcgccgtcgttgagctccactatgcataac
cattcgagcgatagttctacagataatgacaagaaaaccaagcctgtgaaaccaacagca
gtcaggccgctactgaatacgcaagcgagcattccaaccacgggaagcactgccaccata
aaatcgaacatgttatcgagcagcactccaagcaaaaccattcccatgacacctagccat
agctcgcctagttctacgagcaatcacattgccacgactaatgccggcaatttcgccacc
gtagctgcctcgcacagcaattcgcaagccatccattctacctccaataaaacatctact
cacaacagtgagaataatatcttatcatcatcatctacgtccagtgttacgtcgaatgtg
ccgcaaacgattgcgcaacagcacaataataatccggcaccggcacagacgacgcacgta
ctgcacagtcaacagagtcagaatcacaatagtgaaacggaaatgactacaccgataccg
ccatcttcgtcgccgcagtcgtcggtcagcagtagatcctcgccgatgcccgcaaactcc
tgctcgccagcaccgtccactgccaatggtctcatccctaagcttcctgatggaagcatg
tcctctttaaaatccattgcccaacaagtaattgtccgagcaggtctcgagataccacct
tccgagccgaatagaaacatctttgacagtgccaagacgagcaacagtagcaacaacaat
gccacgtcggaagcacacattcctccgctgcttggggtcgcgcccttggggcctgtacca
ttacagaaggagcatcagttgcagttccaaatgatggaagccgcctactatcatatgcca
catccgtctgactcggaaagattacgttcatatttgccgagaaatacatgcaccacgcca
ccttattatcagcaggttcagcttcctcattcggatactgtggagttcttccaacgcctt
tctacggaaactttattcttcatattttattatatggaggggtctaaggggcagtattta
gcagcaaaggctttgaagaaacaaagttggaggtttcacaccaagtatatgatgtggttc
cagaggcacgaggaaccgaaaattattaatgaggaatacgagcagggaacgtacatctat
tttgactacgaaaaatgggggcagaggaaaaaagaaggatttacttttgaatacaagtac
ttagaggacagagatctgaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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