KEGG T00834: Achl

Arthrobacter chlorophenolicus: Achl_1787

Entry

Achl_1787 CDS T00834

Definition

DNA polymerase LigD, polymerase domain-containing protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

ach Arthrobacter chlorophenolicus

Pathway

ach03410	Base excision repair
ach03420	Nucleotide excision repair
ach03430	Mismatch repair
ach03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:ach03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ach03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ach03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ach03450]

SSDB

Motif

Pfam:

DNA_primase_S

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2020578..2021600

AA seq 340 aa
MASEQTTITVPGPHGEREMRISSPSRVLFPDLGLTKLDLARYICEVGEAFIAANGDRPVS
LQRYSDNIDGEMFFSKNPPRGTPDFVRSVKVVYPSARSHPQLVLDEPAAAVWAVQMNTVV
FHPWPSRAENTDNPDQLRIDLDPQPGTDFDDAIPAAQVLRDVLAEAGLESFIKTSGNRGL
HVYAPIEPVREFLDVRHAVIAAAREVERRMPDKVTTAWWKEERGERIFLDFNQANRDRTI
AGAYSPRALPHAPVSCPITWDELETTDPRKFTVLTVPDRLKTVGDPWAGFGEKPGSIGTL
LEWWDRDIRDGLGEMPFPPDYPKMPGEPPRVQPSRAKKQD

NT seq 1023 nt +upstreamnt +downstreamnt
atggcgagcgaacagaccaccatcaccgtcccgggcccccatggcgagcgcgagatgcgc
atttccagccccagcagggtcctgttcccggacctgggcctgaccaagctggatctcgcc
cggtatatctgcgaagtaggggaggcattcatcgcagcgaacggggaccgtccggtgtcc
ctgcagcggtactccgacaacatcgacggcgagatgttcttctcgaagaacccgccccgc
ggcaccccggatttcgtccggtccgtcaaggtggtctacccgagcgcgcgttcccatccc
cagctggtgctggacgagccggcagccgcagtctgggccgtgcagatgaacactgtggtg
ttccacccgtggccgtcccgggcggagaacacggacaacccggaccagctccggatcgac
cttgacccgcaacccggtacggatttcgacgacgccataccggcggcccaggtgctgcgg
gatgtcctggccgaggccggactcgagtcgttcattaagacctcaggcaaccgcggcctg
catgtttatgctccgattgaaccggtccgcgaattcctggacgtccggcacgccgttatt
gccgcagcccgcgaggtggaacggcggatgccggacaaggtgaccacggcgtggtggaag
gaggaacgcggtgagcggatcttcctggacttcaaccaggccaaccgcgaccggaccatc
gcgggcgcctacagcccccgggccctgccgcacgccccggtctcctgtcccatcacgtgg
gacgaactggaaaccactgatccccggaagttcaccgtactcaccgtccccgaccggctg
aagaccgttggcgacccctgggcagggttcggggaaaagcccggcagcatcggcacgctg
ctcgagtggtgggacagggatattagggacgggctcggcgagatgccgttcccgccggac
tatccaaagatgcccggcgaaccgccgagggtgcagccgagccgcgcaaagaagcaggac
tga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ACH (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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