KEGG   Acidovorax carolinensis P3: CBP35_01815
Entry
CBP35_01815       CDS       T04998                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
acis  Acidovorax carolinensis P3
Pathway
acis03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:acis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CBP35_01815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acis03021]
    CBP35_01815
   03400 DNA repair and recombination proteins [BR:acis03400]
    CBP35_01815
Enzymes [BR:acis01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CBP35_01815
Transcription machinery [BR:acis03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CBP35_01815
DNA repair and recombination proteins [BR:acis03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CBP35_01815
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RAD51D_N
Other DBs
NCBI-ProteinID: ART54078
Position
400585..401577
AA seq 330 aa
MQTNLLKPKAINVEQLGHNRAKVALEPFERGYGHTLGNAIRRVLLSSMVGYAATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTARDIQTPHDVEI
VNPDHVIANLSAGGKLDMQIKVEKGRGYVPGNLRRYADESTKSIGRIVLDASFSPVKRVS
YTVESARVEQRTDLDKLVVEIETNGAITAEDAVRASAKILVEQLAVFAQLEGGELAAFDA
PAGPRGNATFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKS
LNEIKEVLASRGLTLGMKLENWPPAGLDKR
NT seq 993 nt   +upstreamnt  +downstreamnt
atgcaaacgaatttgctgaaacccaaggcgattaatgtcgaacagcttggtcacaaccgt
gccaaggtggcgcttgagccgttcgagcgtggctacggccacacattggggaacgccatc
cggcgtgtcctgctgtcgtccatggtgggttacgcagcgacggaagtcaccattgcgggc
gttctgcacgagtactcgtccatcgacggtgttcaggaggacgtggtcaacattcttctg
aacctcaagggcgttgtgttcaagctgcacaaccgtgacgaggtgacgctgagcctgcgc
aaggatggtgaaggcgttgtcactgcgcgggatattcagacaccgcatgacgtggaaatc
gtcaaccctgaccatgttatcgccaacctgtccgcaggtggcaagctggacatgcagatc
aaggtcgagaagggtcgaggctacgtgccaggcaacctgcgtcgctatgcagacgagtcg
accaagtcaattggccgaatcgtgctggatgcgtctttctcccctgtgaagcgcgtcagc
tataccgtggaaagcgcccgtgtcgagcaacgtactgacctggacaagctggtcgtcgag
atcgaaaccaatggtgctatcactgccgaagacgctgtgcgcgcctcggccaagatcttg
gtggagcagctggctgtgttcgcacagctcgaagggggagagctggctgcatttgatgca
cctgcaggcccacgcggcaatgcgacgttcgatccgatcctgctgcgtcctgtggatgag
ctggagttgaccgttcgctctgccaactgcctgaaggctgagaacatctactacatcggt
gacctgatccagcgcaccgagaacgagttgctcaagacccccaatttgggtcgcaagtcg
ctcaatgagatcaaggaagtgcttgcttcgcgcggtctcacccttgggatgaagcttgag
aactggcctccagccggtttggacaagcgttaa

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