KEGG   Acidovorax sp. KKS102: C380_04895Help
Entry
C380_04895        CDS       T02290                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ack  Acidovorax sp. KKS102
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ack00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    C380_04895
Enzymes [BR:ack01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     C380_04895
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     C380_04895
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1072415..1073230
Genome map
AA seq 271 aa AA seqDB search
MPELPEVEVTRRSFANAITGARIEAVVMGKPLRWPLGCDPQLLVGQQVGGLRRRGKYLLL
DMEQGLLLLHLGMSGSLRFATDMPEAGAHDHFDLVTNRGTLRLHDPRRFGAVVYAPSDDS
PVAAKLLGGLGMEPLSEEFLLPTFQAGLKKSRMPIKQLLLAGRLVVGVGNIYASEVLFLS
GIRPTTVASRIGAARVQKLHQAIRSVLARAVEMGGSTLRDFSNADGMAGHFQTAANVYGR
DGQPCHACGTAIELIRQGQRSTYFCRQCQRP
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagttgcctgaagtggaagtgacgcggcgcagttttgctaacgcgatcactgga
gcccggatcgaggcggtggtgatgggcaagcccttgcgatggcctctgggttgcgacccg
caattgctggtgggtcagcaagtgggcggattgcgccggcgaggcaagtacctgttgctg
gatatggagcaaggcctgctgcttctgcatctgggcatgtccggcagcctgcggtttgct
actgacatgccggaagcgggcgcgcatgaccattttgacctcgtcaccaaccgcggcacg
ctgcgcctgcacgacccacgccgatttggcgcggtggtctatgcgccatcagatgattcg
cccgtggccgcgaagctgctgggtgggttgggcatggagcccttgtcagaagagtttctg
ctcccgacttttcaggcgggactcaagaaaagccggatgcccatcaagcaattgcttctg
gcgggacgcttggtggtgggggtggggaatatctatgcctccgaggtgcttttcttgtct
ggcatccgtcccactactgtagcttcccgcatcggcgctgcccgggtccagaagttgcat
caggccattcgttccgtgctggcccgcgctgtagaaatgggggggagcacactgcgcgac
ttttcgaatgccgatggaatggcgggccactttcagacggccgcgaatgtgtatggccgc
gatggtcagccatgccacgcctgtggtacagccatcgagctgattcgccagggacaaaga
agcacttacttctgccggcagtgtcaacgcccctag

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