KEGG T02290: C380

Acidovorax sp. KKS102: C380_14300

Entry

C380_14300        CDS       T02290

Symbol

rumA

Name

(GenBank) 23S rRNA m(5)U1939 methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

ack Acidovorax sp. KKS102

Brite

KEGG Orthology (KO) [BR:ack00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ack03009]
    C380_14300 (rumA)
Enzymes [BR:ack01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     C380_14300 (rumA)
Ribosome biogenesis [BR:ack03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    C380_14300 (rumA)

SSDB

Motif

Pfam:

tRNA_U5-meth_tr RrnaAD Methyltransf_31 Met_10 Methyltransf_25 TPMT Methyltransf_23 MTS Methyltransf_11 Methyltransf_12

Other DBs

NCBI-ProteinID:

AFU46559

UniProt:

K0I5S9

Position

complement(3128640..3130103)

AA seq 487 aa
MSAPKELSPSFEPTEQNAQDNLPEGWLHVQSMDLDAQGVARKPDGKVVFIDGALPFELVT
ANTHRKKNNWEQASLVAIHRESSQRVRPDCPHFGLHAGACGGCKMQHLHVGAQVAVKQRV
LEDNLWHLGKVKAETMLRPIEGPAWGYRYRARLAVRHVIKKGQVLVGFHERKSRYIADMQ
TCKILPPHVDAMLMPLRALIASLDARDTCPQIELACGDTVTALVLRHLEPLSAEDIARLR
AFAAEHHVQWWLQPKGPDTVKLLDEGGEQLSYALPDFGITMPFKPTDFTQVNPHINRVLV
SRALRLLDVQPHERVIDWFCGLGNFTLPLATQAREVLGIEGSEALVARSRENYALNQAQA
PDHKALAATDFVARNLFEMTPEMLVADGAADKWLVDPPREGAFALAKALADIEQARIGAE
GAGPLPAGAEGWTPPKRIVYVSCNPATLARDAGLLVHLAGYRCTAAGMVNMFPHTAHVES
MAVFERV

NT seq 1464 nt +upstreamnt +downstreamnt
atgagcgcaccgaaagaactatccccctcgtttgaacccaccgagcagaacgctcaagac
aacctgcctgaaggctggctgcatgtgcagtccatggacctcgacgcccagggcgtggcc
cgcaagcctgacggcaaggtggtcttcatcgatggcgccctgccattcgagctggtcacc
gccaacacccaccgcaaaaagaacaactgggagcaggccagcctggtggcgatccaccgc
gaatcgtcccagcgcgtgcggccggattgcccgcactttggcctgcacgcaggcgcctgc
ggcggctgcaagatgcagcatctgcacgtcggtgcccaagtggccgtcaagcagcgggtg
ctggaggacaacctctggcacctgggcaaggtgaaggccgagaccatgctgcgtcccatt
gaagggcccgcctggggctaccgctaccgtgcccgcctggccgtgcgccacgtgatcaag
aaggggcaggtgctggtgggctttcatgagcgcaagagccggtacatcgccgacatgcag
acctgcaagatcctgccgccgcatgtcgatgccatgctgatgcccctgcgcgccctgatt
gccagcctggacgcccgcgacacctgcccgcagatcgaactggcctgtggtgacaccgtg
accgcgctggtattgcgccacctggagccgctctccgccgaggacatcgcccggctgcgc
gcctttgccgcagagcaccacgtgcaatggtggctgcagcccaagggcccggacaccgtg
aagctgctggacgagggtggtgagcagctgtcgtacgcactgccggactttggcatcacc
atgcctttcaagcccaccgacttcacccaggtgaacccgcacatcaaccgggtgctggtg
agccgcgcgctgcgcctgctggacgtgcagccgcacgagcgcgtgatcgactggttctgc
ggcctgggcaacttcacgctgccgctggccacgcaggcgcgcgaggtgctgggcattgaa
ggcagtgaggccctggtggcccgctcgcgtgagaactatgcattgaatcaggcccaggcg
ccggaccataaagcgctggcagctacggattttgtagcgcgtaacctgttcgagatgaca
ccggagatgctggtggccgacggcgctgccgacaaatggctggtggacccaccccgcgaa
ggggcgtttgctctggccaaggcgttggcggacatcgagcaggcccgcattggcgccgag
ggcgctggcccgttgcccgcaggggccgaaggctggacgcctccgaagcgcattgtgtac
gtgagctgcaacccggccaccctggcgcgcgacgcggggctgctggtacatttggccggc
taccggtgcacggcggcgggcatggtgaacatgtttccgcacacggcccatgtggaaagc
atggcggtgttcgagcgggtctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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