KEGG T01411: AciX9

Granulicella tundricola: AciX9_0409

Entry

AciX9_0409 CDS T01411

Definition

ATP dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

acm Granulicella tundricola

Pathway

acm03410	Base excision repair
acm03420	Nucleotide excision repair
acm03430	Mismatch repair
acm03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:acm03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:acm03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:acm03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:acm03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

489334..490395

AA seq 353 aa
MPPVLPMLAKRVAAIPEGEGWVFEPKWDGFRVLVFRDGDEILLQSRDTKPLNRYFPDVVE
TLLRELPPRCVLDGEIVIARDGGLDFDALQLRVHPAASRVKMLAEQTPASVVFFDLLCVG
DEDLTGAPFSERRKRLEEVLAGAKVPVHITPATQDHAVASDWFERFEGAGLDGVMAKLLG
GTYQADKRVMLKVKHERDCDCVVAGFRWHKDGPGTLVGSLLLGLYDDAGALQHVGVCASF
TAAKRKELVEFLAPYREGAMEGHPWAGWAEADVEGRMPGGKSRWTGSKDLSWVALRPVLV
VEVAYEHMQGMRFRHMSQFRRWRTDKAPKDCTYAQLEVVAAQELMEIFRESTL

NT seq 1062 nt +upstreamnt +downstreamnt
atgccgccggtgctgcctatgcttgcgaagcgggtggctgcgatccctgagggtgagggg
tgggtgttcgagccgaagtgggatgggtttcgggtgctggtgtttcgggatggggacgag
atcctgctgcagagccgggataccaaaccgctgaaccgatactttccggatgtggtggag
acgctgctgcgtgagttgccgccgcggtgcgtgctcgacggagagattgtgattgcgcgg
gatggcgggttggactttgatgctctgcaactgagggtgcatccggcggcttctcgggtg
aagatgctggcggagcagacgccggcgtcggtggtgttcttcgatctgctttgcgtgggg
gatgaggatcttacgggggctccgttttctgagcggcgcaagcggctggaagaggtgctc
gcgggggctaaggtgccggtacacatcacgcccgccactcaggatcatgcggtggcttcg
gattggtttgaaagatttgagggggcggggctggatggggtgatggccaagctgctcggc
gggacgtatcaggctgataagcgggtcatgctgaaggtgaagcatgagcgggactgcgac
tgcgtggtcgcggggtttcggtggcacaaggatgggccggggacgctggtggggtcgctg
ctgctggggctctatgacgacgcgggtgctttgcagcatgtgggggtttgtgccagcttt
acggcggcgaagcggaaggagcttgtggagttcctcgcgccttatcgcgaaggggctatg
gaggggcatccgtgggcgggatgggcggaggcggatgtcgagggaaggatgccgggcggg
aagagccggtggacgggcagcaaggacctgagctgggtggcgctgcggccggtgttggtg
gtggaggtggcgtacgagcatatgcaggggatgcggtttcggcatatgagccagttcagg
cggtggcggacggataaggcaccgaaggactgtacgtatgctcagttggaggtggtggct
gcgcaggagttgatggagatctttcgggaatcgaccctttga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ACM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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