KEGG T01411: AciX9

Granulicella tundricola: AciX9_0660

Entry

AciX9_0660 CDS T01411

Definition

ATP-dependent DNA ligase I (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

acm Granulicella tundricola

Pathway

acm03030	DNA replication
acm03410	Base excision repair
acm03420	Nucleotide excision repair
acm03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:acm03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:acm03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:acm03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:acm03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

800307..802313

AA seq 668 aa
MALFGAVAGLAEEMAGTASRLKKRAAIAAAILAVHEELAEEVGLFCLYLAGLPFAEADPR
KLNAGGALLSKALLAVSGATGEQLTAGYRKYGDMGAAGFDLLQLHPTSQTRDMGHPLLLG
DVRDAFAGMATAKTTAIRAGLVEGLLRRATALEAKYLLKLMLGDMRIGVKQSLVEEAIGV
AAAAEVADVRHAVMLEADLGGAAMRAFGGTLAEARMRLFHPLGFMLASPVETPEEAIERF
TAKPVKVAKAKKSKKTEESDELLVAEIEGAMLEDDKRTTEGTEGKERSTEATVGVQAFLE
DKYDGMRAQLHFGDAEQVGRVAIYSRNREDITESFPELCEAFSEASGELGGLILDGEILG
WDFQHGVALPFALLGQRIGRKKVGNEIRQQVPVVFMAFDLMFERGKLTLGLPLRERRRRL
EEVVGALAEKAVSPLVLTEHAARRHEAQARMFGGDEEAEAGVARLMLSPSKLVESAEEID
RAYADARARANEGVMIKAADSVYLPGRRGLAWVKLKRELATLDVVVTGAEFGQGRKAGTL
SDYTFAVQTDAGELLNVGKAYSGVTDAEILELTEFFKAHTLEDHGHSRTVEPLVIFEVAF
NNVMRSDRHASGFALRFPRILRIRTDKPLGEIDTVARVEEIYQSQVDKPKDSAKAVKGSG
QAVMGQLR

NT seq 2007 nt +upstreamnt +downstreamnt
atggctttgtttggggcggtggcggggttggcggaggagatggcgggtactgccagcagg
ctgaagaagcgggctgcgattgcggctgcgattttggcggtgcatgaggagttggctgag
gaagttgggctgttttgcttgtatctggcagggctgccgtttgcggaggctgatccgcgg
aagttgaatgcgggtggggcgcttttgagcaaggctttgctggcggtgagtggggctacg
ggagagcaactgaccgcgggttatcggaagtacggggatatgggggcggcggggttcgat
ctgttgcagctccatccaacgtctcaaacgcgagacatggggcacccgcttttgctgggg
gatgtgcgggatgcgtttgcggggatggctacggctaagacgacggcgattcgggcgggg
ctggtggaggggctgctgcggcgggctacggcgctcgaagcgaagtatctgctgaagctg
atgcttggggatatgcggattggggtgaagcagagtttggtggaggaggcgattggggtg
gcggccgcggctgaggtggctgatgttcgacatgcggtgatgctggaggcggatctgggt
ggggcggcgatgagggcgtttggggggacgctggcggaggcgaggatgaggctgtttcat
ccgctcgggttcatgctggctagtccggtggagacaccggaggaggcgatcgagcggttt
acggctaagccggtgaaggtggcgaaggcgaagaaaagtaagaaaaccgaggagtctgac
gagttgctggttgcggagatcgagggggcgatgcttgaagacgacaagcgaaccacagag
ggcacggagggtaaggagaggagcacagaggccactgtgggggtgcaggcgtttttggag
gataagtatgacgggatgagggcacagcttcactttggggatgcggagcaggtcggtagg
gtggcgatctattcgcggaatcgcgaggacattacggagagctttccggagttgtgtgag
gcgttctcagaggcttcgggtgagcttggtgggctgattttggatggggagattctgggg
tgggattttcagcatggggtggcgttgccgtttgctttgctggggcagaggatcgggcgg
aagaaggtgggaaatgagattcggcagcaggtgccggtggtgtttatggcgttcgatcta
atgtttgagcggggaaaactgacgctggggctaccgctgcgggagaggcgtcggcgcttg
gaggaggttgtgggggcgctggcggagaaggcggtgtcgcctcttgtgttgacggagcat
gcggctcggcggcatgaggcgcaggcgaggatgtttggcggggatgaagaggctgaggct
ggggtggcgcggctgatgctttcgcccagcaagctggtggagagtgcggaggagatcgac
cgcgcgtatgcggatgcgagggctcgggcgaatgaaggggtgatgatcaaggcggcggat
tcggtgtatctgccggggcggcgggggcttgcgtgggtgaagctgaagcgggagttggcg
acgctggatgtggtggtgaccggggccgagtttgggcagggaaggaaggctgggacgttg
agcgactatacgtttgcggtacagacggatgcgggggagttgctgaatgtggggaaggct
tactcgggtgtcaccgacgcggagatattggagctgacggagttcttcaaggcgcatacg
ctcgaggatcatgggcactccaggacggtggagccgctggtgatctttgaggtggcgttc
aacaacgtcatgcggagcgatcgtcatgcgagtgggtttgcgctgcggtttccgaggatt
ctgcggatcaggacggataagccgctgggcgagatcgatacggtggcgagggtggaggag
atctatcagtcgcaggtggataaacctaaggacagtgcaaaagcagtgaagggaagtggc
caggcagtgatggggcagttgcggtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ACM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

Download RDF

DBGET integrated database retrieval system