KEGG T00833: A2cp1

Anaeromyxobacter dehalogenans 2CP-1: A2cp1_1020

Entry

A2cp1_1020 CDS T00833

Definition

DNA polymerase LigD, polymerase domain-containing protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

acp Anaeromyxobacter dehalogenans 2CP-1

Pathway

acp03410	Base excision repair
acp03420	Nucleotide excision repair
acp03430	Mismatch repair
acp03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:acp03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:acp03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:acp03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:acp03450]

SSDB

Motif

Pfam:

DNA_primase_S

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(1143855..1144796)

AA seq 313 aa
MARAQQGVEVEVEGRRIQLRNLDKVFYPEAGFTKGEVVDYYRRVAPVLLPHLRDRPLTLK
RYPEGVDGPHFYEKRCPRHRPDWFRTEAIWSEGNQDYIDYCVVDDLSSLVWLASIADLEL
HPSLSRVDDVERPTALVFDLDPGPPAELLACCEVALLLRRLLAALGLEAFPKSSGSKGMQ
LYVPLSGATYADTKPFAHAVARVLERRHPQLVVERMAKALRGGKVLVDWSQNDPHKTTVC
VYSLRARPRPTVSTPLRWAEVEKAVRTRDAGGLVFEAGAVLRRVERVGDLFAPVLTLRQR
LPAPAELERAAGA

NT seq 942 nt +upstreamnt +downstreamnt
gtggcgcgcgcgcagcagggcgtggaggtcgaggtggaggggcggcggatccagctgcgc
aacctcgacaaggtcttctaccccgaggccggcttcaccaagggtgaggtggtggactac
taccgccgcgtcgcccccgtgctcctgccgcacctgcgggatcggccgctcacgctgaag
cgctacccggagggcgtggacgggccgcacttctacgagaagcgctgtccgcgccaccgc
ccggactggttccggaccgaggcgatctggagcgagggcaaccaggactacatcgactac
tgcgtggtggacgacctgtcctcgctggtgtggctcgccagcatcgccgacctggagctc
cacccctcgctgtcgcgggtggacgacgtggagcggcccaccgcgctcgtgttcgacctc
gacccgggcccgcccgccgagctgctcgcctgctgcgaggtggcgctgctgctgcggcgg
ctgctcgccgcgctgggcctggaggcgttcccgaagagctccggctcgaagggcatgcag
ctgtacgtgccgctctccggcgccacctacgcggacacgaagccgttcgcgcacgccgtc
gcccgcgtgctggagcgccgccacccgcagctcgtggtcgagcgcatggcgaaggcgctc
cgcggcggcaaggtgctggtggactggagccagaacgacccgcacaagaccaccgtctgc
gtctactcgctccgggcgcggccgcgccccaccgtctccaccccgctccgctgggcagag
gtggagaaggccgtgcggacccgcgacgcgggcgggctggtgttcgaggcaggcgcggtg
ctccggcgggtcgagcgcgtgggggacctgttcgccccggtgctgacgctgcgccagcgc
ctgcccgccccggcggagctcgagcgggcggccggcgcgtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ACP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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