KEGG   Anaeromyxobacter dehalogenans 2CP-1: A2cp1_2734
Entry
A2cp1_2734        CDS       T00833                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
acp  Anaeromyxobacter dehalogenans 2CP-1
Pathway
acp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A2cp1_2734
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acp03019]
    A2cp1_2734
   03009 Ribosome biogenesis [BR:acp03009]
    A2cp1_2734
Enzymes [BR:acp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     A2cp1_2734
Messenger RNA biogenesis [BR:acp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     A2cp1_2734
Ribosome biogenesis [BR:acp03009]
 Prokaryotic type
  rRNA helicases
   A2cp1_2734
SSDB
Motif
Pfam: DEAD Helicase_C ResIII DbpA AMP_N
Other DBs
NCBI-ProteinID: ACL66071
UniProt: B8JE06
Position
complement(3015128..3017086)
AA seq 652 aa
MEEVHGEAPSAAPSDYVSEASFDDMGLSEPVRRAVAEHGYTKPTPVQSATFRPIRDGKDV
IVRSKTGTGKTAAFSIPILERIPDGRRKPSALVMCPTRELAIQVAEEVTALAKHRDLGVV
TIYGGASMGDQLDKLKAGAEIVVGTPGRIYDHIRRKTLRLEEVMVCCLDEADEMLNMGFF
EEVTRILDHLPADVQQLLFSATVPADIEQIIHDYLTDPETILLSGDEYKVENINNVMYPT
VDAYPKPRNLLYMIGMEEPEAAIIFCNTRSDTSLVTAVLNRNGYDAELLNGDLPQKERER
VMAKVKRGEVRFMVATDIAARGIDISDLSHVINYSLPEDPAVFLHRVGRTGRIGKKGTSL
SLVSGGDLHTLTALQKKYEIVFEKKALPTPEEARKIWTDRHVAVLKDAMSSSIFEAYIPL
AQELRNRPDGEYLISFALKYFFTHQRMEKAQDREKAEHKRTEHERRVQPEGRAAGRRAPG
GEEREGREAGEARREAGEGRPEGGRERSRDRGRDRDRDRDRDRDRDRDRDRGRRGGRDRE
ATAGARPEAPPAANGDGTPVVEVAAEAGAAAAPQRARVFVTLGEQDGADEARVREALRAL
APELEPVGVEVRRSHSYVDVPPAALEATVAALDGKEWNGKKLAAEKARRRRR
NT seq 1959 nt   +upstreamnt  +downstreamnt
atggaagaagtccacggcgaggcgccctcggcggcgccctctgattacgtttcggaagcg
tcgttcgacgacatggggctctcggagccggtgcggcgcgcggtcgcggagcacgggtac
acgaagccgacgccggtccagtccgcgaccttccggcccatccgcgacggcaaggacgtg
atcgtccggtccaagaccggcaccggcaagaccgccgcgttctccatccccatcctcgag
cgcatcccggacggccgccgcaagccatcggcgctggtgatgtgcccgacccgcgagctc
gccatccaggtcgccgaggaggtcaccgcgctggcgaagcaccgcgacctcggcgtggtg
acgatctacggcggcgcgtcgatgggcgaccagctcgacaagctgaaggccggcgcggag
atcgtggtcggcacccccggccgcatctacgaccacatccgccgcaagacgctccggctc
gaggaggtgatggtctgctgcctcgacgaggcggacgagatgctgaacatggggttcttc
gaggaggtgacgcgcatcctcgaccacctccccgccgacgtgcagcagctgctcttctcc
gccaccgtcccggcggacatcgagcagatcatccacgactacctcaccgacccggagacc
atcctgctctccggcgacgagtacaaggtcgagaacatcaacaacgtgatgtacccgacc
gtggacgcgtacccgaagccgcgcaacctcctctacatgatcggcatggaggagcccgag
gcggcgatcatcttctgcaacacgcgcagcgacacctcgctcgtcaccgcggtgctgaac
cgcaacggctacgacgccgagctgctgaacggcgacctgccgcagaaggagcgcgagcgg
gtgatggcgaaggtgaagcgcggcgaggtccgcttcatggtcgcgaccgacatcgcggcc
cgcggcatcgacatctccgacctctcgcacgtcatcaactactcgctgcccgaggacccg
gcggtgttcctgcaccgcgtgggccgcaccggccgcatcggcaagaagggcaccagcctc
tcgctcgtgtccggcggcgacctgcacacgctgaccgcgctgcagaagaagtacgagatc
gtcttcgagaagaaggcgctcccgacgccggaggaggcgcggaagatctggaccgaccgc
cacgtcgccgtcctcaaggacgcgatgagctcctcgatcttcgaggcctacatcccgctc
gcccaggagctgcgcaaccggcccgatggcgagtacctgatctcgttcgcgctcaagtac
ttcttcacgcaccagcgcatggagaaggcgcaggaccgcgagaaggccgagcacaagcgc
acggagcacgagcgccgggtgcagcccgagggccgcgccgccgggcgccgcgcgccgggc
ggcgaggagcgcgagggccgcgaggccggtgaggcccggcgcgaggccggcgagggccgg
cctgagggcggccgggagcgctcgcgcgaccgcggccgcgatcgggaccgggaccgggac
cgggatcgggaccgggatcgggatcgggatcgcggccgccgcggcggacgcgatcgcgag
gcgacggccggcgcccggcccgaagctccgccggcggcgaacggcgacggcaccccggtg
gtcgaggtggccgccgaggccggagcggccgcggcgccccagcgcgcccgcgtcttcgtg
acgctcggcgagcaggacggcgcggacgaggccagggtgcgcgaggcgctccgggcgctc
gcgccggagctcgagccggtcggcgtggaggtgcgccgctcgcacagctacgtggacgtc
ccgcccgccgcgctggaggccaccgtggccgccctcgacggcaaggagtggaacggcaag
aagctcgccgccgagaaggcgcgccgccggcggcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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