KEGG   Actinomyces sp. oral taxon 414: AM609_00880
Entry
AM609_00880       CDS       T04083                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
acq  Actinomyces sp. oral taxon 414
Pathway
acq03030  DNA replication
acq03430  Mismatch repair
acq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:acq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AM609_00880
   03430 Mismatch repair
    AM609_00880
   03440 Homologous recombination
    AM609_00880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acq03032]
    AM609_00880
   03400 DNA repair and recombination proteins [BR:acq03400]
    AM609_00880
Enzymes [BR:acq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AM609_00880
DNA replication proteins [BR:acq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AM609_00880
DNA repair and recombination proteins [BR:acq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AM609_00880
SSDB
Motif
Pfam: RNase_T Rv2179c-like IF2_N RNase_H_2
Other DBs
NCBI-ProteinID: ALC98389
UniProt: A0A0M5JU31
Position
complement(235047..235925)
AA seq 292 aa
MPFYRRPARDRLAPLVRPAALAAGGGPGARGSGAGAPGPAATASPGLDARGSGPAVGSGA
RGNRTAGRVGYAVVDLETTGLSPATDSIIEIGLVLAGPDGVAQRRWSTLVNPGPGPDGDI
EVGPTFVHGLVAADLAGAPRFDDVADLLARDLAGRVVVAHNARFDVGFLTRALGRSGHLV
RGARVPRMCTMEWARHFMATPSRRLVACCEAAGVSIGQHHSALDDAEAAAGLLRHYMSVG
RLRGEEPVAWARSLSDAEGFGGWSWDEEAADAQEGRLVPRSGPGVPRAGTNR
NT seq 879 nt   +upstreamnt  +downstreamnt
atgcccttctatcgacgccccgcccgcgaccgcctcgcgccgcttgtccgtccggccgcg
ctcgcggccggcggcgggcccggggcccgcggttccggcgccggcgctcccggccccgcc
gcgaccgcatccccgggcctcgacgcgcgcggttccggccccgccgtcggctccggggcc
cgcggcaaccggacggccggccgggtcggctacgccgtcgtcgacctggagaccaccggc
ctgtcccccgccaccgactccattattgagatcggactcgtgctcgccgggcccgacggc
gtcgcgcagcgccgctggtccacactcgtcaaccccgggcccggtcccgacggcgatatc
gaggtggggccgaccttcgtccacggactcgtcgccgcggacctggcgggggcgccgcgc
ttcgacgacgtggccgacctgctcgcgcgggacctggccgggcgcgtcgtcgtcgcccac
aacgcccggttcgacgtcggtttcctcacccgggcgctgggccgctccgggcatctcgtg
cgcggggcgcgggtgccgcggatgtgcaccatggagtgggcgcgccacttcatggccacg
ccctcgcgccggctggtcgcctgctgcgaggcggcgggcgtgagcatcgggcagcaccac
agcgcgctcgacgacgccgaggccgcggccggactgctgcgccactacatgtcggtgggg
cggctgcgcggcgaggagccggtggcctgggcccggtccctgtccgacgccgagggcttc
ggcggctggagctgggacgaggaggcggccgacgcgcaggaggggcggctcgtgccgcgc
agcgggccgggggtgccgcgggccggtacgaaccgctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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