KEGG   Anolis carolinensis (green anole): 100557963Help
Entry
100557963         CDS       T01608                                 

Gene name
lamc1
Definition
laminin, gamma 1 (formerly LAMB2)
Orthology
K05635  
laminin, gamma 1
Organism
acs  Anolis carolinensis (green anole)
Pathway
Focal adhesion
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:acs00001]
 Environmental Information Processing
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    100557963 (lamc1)
 Cellular Processes
  Cellular commiunity
   04510 Focal adhesion
    100557963 (lamc1)
Cell adhesion molecules and their ligands [BR:acs04516]
 1. Immunoglobulin Superfamily
  Neural system
   Enzymatic CD
    PTPRF, LAR; receptor-type tyrosine-protein phosphatase F [KO:K05695]
     Laminin-1 Extracellular matrix (ECM) components
      100557963 (lamc1)
 2. Integrin Family
  Beta1 integrins
   VLA-1
    ITGB1; integrin beta 1 [KO:K05719]
      100557963 (lamc1)
     Laminin-2 Extracellular matrix (ECM) components
      100557963 (lamc1)
   VLA-2
     Laminin-1 Extracellular matrix (ECM) components
      100557963 (lamc1)
   VLA-3
      100557963 (lamc1)
     Laminin-10 Extracellular matrix (ECM) components
      100557963 (lamc1)
     Laminin-11 Extracellular matrix (ECM) components
      100557963 (lamc1)
   VLA-6
     Laminin-1 Extracellular matrix (ECM) components
      100557963 (lamc1)
     Laminin-8 Extracellular matrix (ECM) components
      100557963 (lamc1)
   VLA-7
     Laminin-1 Extracellular matrix (ECM) components
      100557963 (lamc1)
  Beta4 integrins
   alpha 6 beta 4
    ITGB4; integrin beta 4 [KO:K06525]
     Laminin-1 Extracellular matrix (ECM) components
      100557963 (lamc1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Ensembl: 
Position
Un
AA seq 1611 aa AA seqDB search
MRPAVAAFPQLLLLLLLLVAARRCAGAMDECTEEEGGGGRAQRCMPEFVNAAFNATVVAT
NTCGRPPEEYCVQTGVTGVTKSCHLCDAAQPHLSHGAALLTDYNNQADATWWQSQTMLAG
AQYPSAINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCENTY
QKSNRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTA
TDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECMKNEYGKLSCN
CKHNTFGVDCEKCLPFYNDRPWRRATAESASECLPCNCNGRSQECYFDPELYRSTGHGGH
CTGCFGNTDGPNCQRCRENFYRLGSEEVCLPCNCNPVGSLSTQCDNYGRCSCKAGVMGDK
CDRCQPGFHSLTEAGCRRCSCDPAGSTDECNMETGRCTCKDSVEGFNCERCKPGFFNLDS
SNLRGCTPCFCFGHSSVCTNANGYSIYRITSSFQIGEEEWHAEQRDGSEXVQWISETQEI
SVISDTPFPIYFIAMLXEXLFSFMGKFLGNQILSYGQNLTFSFRIDRRDTRLSAEDIILE
GAGLRVSVPLIAQGNSYPSENIVKYTFRLHEATDYPWRPSLTPFEFQKLLRNLTAIKIRG
TYSERNAGYLDDVTIVSARPGPGITATWVESCTCPTGYLGQFCEQCADGYRRETPSLGPY
SPCVPCFCNGHSETCNPETGACNCRDNTAGPHCEKCSDGYYGDATTGTSSDCQPCPCPGG
STCAIVPKTKEVVCTNCPAGTTGKRCELCDDGYFGDPLGTNGPARFCRLCQCSDNIDPNA
VGNCNRLTGECLKCIYNTAGFYCDRCKDGFYGNPLAQNPEDKCKACNCNPYGTMNVQTSC
SQVTGQCECLPHVTERDCSSCEPGFYNLQSGRGCERCDCHPLGSTNGHCDIQTGQCECQP
GITGQRCERCEANHFGFGREGCKPCDCDPEGSRSLQCKDDGRCECKEGFVGNRCDQCEEN
YFYNRSWPGCQECPACYRLVKDKVAEQRERLQELENLIANIGTGDETITDQAFEDRLKDA
ERDVMDLLRDAQSIKDVDQGLMDRLHEINRTLSSQLGRLRNIQNTVDETENLAGQAQTRV
DNTQELIETASNMLQRARMAVANVSITPPQSTGDPNNMTVLAEEARQLATRHKEEADDIV
RIAKEANDTSSQAYQLLLDTLSGENQTMDDINDLNRKYNQAKNISRDLERQANKVHAEAE
EAGNKALQIYANLTSLPSIDTDKLENEANKIKKEARDLDQLITRKLKDYEDLREDMKGKE
LEVQNLLEKGKTEQQTADQLLARADAAKALAEEAAKKGKDTLQEANDILNNLNDFDKRVN
DNKTAAEDALKKIPAITRTILEANNKTRQAEAALGSAAADAREAKNKAGDAEKIASSVQK
NAAETKADADKTFSIVADLDKEVDDMLQQLEDAEKELKRKQESADQDMMMAGMASQAAQE
AEDNARKAKNSVNSLLSTINDLLEKLGSVEPVDSSKLNDIEDTLNAAKKQMRDNDLDQKV
SDLEKAAEKQASAISEYNRDISTIRKDIANLEDIKKTLPTGCFNTPSIEKP
NT seq 4836 nt NT seq  +upstreamnt  +downstreamnt
atgaggccggctgtggcggcgttccctcagctgctgctgttgttgcttcttctggtggcg
gcgaggcgctgcgcgggcgccatggacgagtgcacggaggaggagggcggcggcgggcgg
gcgcagcggtgcatgccggagttcgtgaacgcggccttcaacgccacggtggtggccacc
aacacgtgcggccgcccccccgaggagtactgcgtgcagacgggcgtcacgggggtcacc
aagtcgtgccacctgtgcgacgccgcccagccccacctgagccacggcgccgccctcctc
accgactacaacaaccaggccgacgccacctggtggcagagtcagaccatgctggccggc
gcccagtaccccagcgccatcaacctcacactccacctcggaaaggcctttgatattacc
tatgtacggctgaagttccacaccagccgaccagagagctttgccatttacaaacggacc
cgggaagatggcccatgggtgccttatcagtattacagtggatcctgtgagaacacctac
cagaaatccaatcgaggctttatcaggactggggaagatgaacagcaggcactttgcaca
gatgaattcagcgacatctctccattgacaggaggcaatgtggccttttcaactttggaa
gggaggcccagtgcttataactttgataacagccctgtcttgcaggaatgggtaactgcc
actgatatcagggtgacactcaatcgcttgaacacctttggagatgaagtttttaatgat
cccaaagttctcaagtcctattattatgcaatttctgactttgctgtaggtggcaggtgc
aagtgcaatggccatgcaagtgagtgtatgaagaatgaatatggaaaactttcctgcaat
tgcaaacacaataccttcggggttgactgtgaaaagtgcctccctttttacaatgaccgg
ccttggcgacgagcaacggcagagagtgctagtgaatgtttgccctgtaactgcaatgga
cgatcacaggagtgttattttgatcctgagctgtaccgttccaccggtcatgggggccac
tgcaccggctgctttggtaacacagatggaccaaactgtcaaaggtgccgggagaatttc
taccgtcttggcagtgaagaagtgtgtctaccatgcaattgcaatcctgttggctccctc
agcacacagtgtgacaactatggacgatgcagttgtaaagctggtgtgatgggtgacaaa
tgtgacagatgtcagcctggtttccattctctcacagaagctggttgcaggcggtgctcc
tgtgatcctgctggcagcacagatgagtgcaatatggaaacgggacgttgcacttgtaag
gacagtgtggaggggttcaattgtgagaggtgtaaacctggctttttcaacctggattcc
agcaaccttaggggatgtactccttgcttctgttttgggcattcttctgtttgtacaaat
gcaaatggatatagcatctacagaattacctcaagtttccagattggagaagaagagtgg
catgcagaacagcgagatggttctgaanatgtccagtggatttctgagactcaggaaata
tctgtaatctcagatacaccttttcccatctatttcattgctatgttatgagaatagtta
ttttcattcatgggcaagttccttggaaatcaaatcttgagttatggtcaaaacctgaca
ttctcttttcggatcgataggcgagacacacgcctttctgctgaggatattattcttgaa
ggtgctggactgagagtatcagtccctctaatagctcaaggcaactcctatcccagtgag
aacatagtgaagtacactttcaggctccatgaagcaacagattatccctggaggccttct
cttaccccatttgagttccagaagctgctccgcaatttaacagctatcaagattcgtggg
acttacagtgagaggaatgctggatatttagatgatgtcactattgtgagtgctcggcct
gggcctggaatcacagcaacgtgggtggaaagttgtacttgtcctacaggatatttgggg
cagttctgtgaacaatgtgctgatggctacaggagagagactcccagtctagggccttac
agtccatgtgtgccatgtttctgcaatgggcatagtgaaacctgcaaccctgaaactgga
gcctgtaactgcagagacaacacagcaggtcctcattgcgagaagtgcagtgatggctat
tatggagatgcaactacaggaacttcttcagattgccagccgtgtccatgtccaggaggg
tcaacttgtgccatcgtaccaaaaacgaaggaggtggtgtgcactaattgcccagctggt
actacaggcaaaaggtgtgaactgtgtgacgatggctattttggagacccacttggcaca
aacggtcctgccaggttttgccgcctctgccagtgcagtgacaacattgaccctaatgct
gttgggaattgcaaccgcttgacaggggaatgtctgaaatgcatctacaatacagctggc
ttctattgtgaccggtgcaaagatggattctacgggaatcccttagctcagaatccagag
gacaaatgcaaagcttgcaactgtaatccttatggaaccatgaatgtgcagacaagctgc
agtcaagtgaccggccaatgtgagtgcctcccccatgtgacagagcgggactgcagctcc
tgtgagcctggcttttacaacttgcagagcggacgtggttgcgagaggtgtgactgccat
ccgttgggttccacaaatggccactgtgacatacagactgggcagtgcgaatgccagcca
ggcatcactggccagcgttgtgagaggtgtgaagccaaccattttggatttggtcgtgaa
ggctgcaaaccttgtgactgtgaccctgaaggttctcgctctcttcagtgtaaagatgat
ggtcgttgtgaatgcaaagaaggatttgtgggaaatcgttgtgaccaatgtgaagagaac
tatttttataaccgatcctggcctggctgtcaagagtgtcctgcctgttatagactggtg
aaagataaggtggcagaacaaagggagagattacaggaactggaaaaccttatagccaac
ataggaacaggtgatgaaactataacagaccaggcctttgaagacagactgaaagatgca
gagagggatgtcatggacttgctccgagatgctcaaagcatcaaagatgtagatcaaggt
ttgatggatcgcctgcatgagatcaacagaaccctgtccagtcagcttggtaggttgagg
aatattcaaaacacagtggatgaaacagaaaaccttgcagggcaggcccaaacccgggtt
gacaacacacaagaactcattgaaacagcttccaatatgctacagagagcaaggatggct
gttgccaatgtgtctattactccaccacaatcaactggagaccccaacaatatgacagtc
ctggcggaagaagcccgccagctagctacacgacacaaagaagaagcggatgacattgtc
cgtatagctaaggaagcaaatgatacatcctcacaagcataccagttgctcttggacaca
ctgtcaggagagaaccagacaatggatgacatcaatgaccttaacagaaagtataaccaa
gcaaagaacatctcccgagatttggaaaggcaggcaaacaaggtccatgcggaagcagag
gaagctgggaacaaagcgctgcagatctatgctaatctcaccagtctgccatctatagac
actgacaaactagagaatgaggcaaataaaatcaagaaagaagccagagatctggaccag
ctaatcaccagaaagctgaaagattatgaagatctgagagaagacatgaaagggaaggag
ctggaggtacaaaaccttttggagaaaggcaaaactgaacagcagactgctgatcagctc
ttggctcgagcagatgctgcaaaggctctggctgaagaagctgccaagaaggggaaggac
acgctccaggaggccaatgacattctcaacaatttgaatgattttgataagcgtgtgaac
gataacaagactgctgctgaggatgctctaaagaaaattcctgccattacccgtactatt
ttggaggccaacaataagacccgtcaagcggaagcagcattggggagcgctgctgctgat
gccagggaagcaaagaacaaagctggtgatgctgagaaaattgctagttctgttcagaaa
aatgctgctgagaccaaggctgatgctgacaagaccttctctattgttgccgatttggac
aaagaagtggatgacatgctgcagcaactggaagatgctgaaaaagaactaaagaggaaa
caggaaagtgcggatcaagatatgatgatggcaggaatggcttcacaagcagctcaggaa
gcagaagacaatgcaaggaaagcaaagaactctgttaacagcttactcagcacaatcaat
gacctcctcgagaagttagggagtgtggagcctgtggattcaagtaaactgaatgatatt
gaagataccttaaatgctgccaaaaaacagatgagggacaacgatctggatcaaaaagtg
tctgatctagagaaagcagcagaaaagcaagccagtgccatcagtgaatacaacagggac
attagcaccatcaggaaagacattgccaatctagaggacatcaagaagaccttaccaact
ggctgtttcaacaccccgtccattgaaaaaccctaa

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