KEGG   Aspergillus clavatus: ACLA_016520
Entry
ACLA_016520       CDS       T01148                                 
Name
(RefSeq) 3'-5' exoribonuclease (Csl4), putative
  KO
K07573  exosome complex component CSL4
Organism
act  Aspergillus clavatus
Pathway
act03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:act00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACLA_016520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:act03019]
    ACLA_016520
Messenger RNA biogenesis [BR:act03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     ACLA_016520
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     ACLA_016520
SSDB
Motif
Pfam: EXOSC1 ECR1_N IFTAP
Other DBs
NCBI-GeneID: 4706690
NCBI-ProteinID: XP_001274632
UniProt: A1CBT8
AA seq 253 aa
MASTLPKLAIPGQQLGSITSYFAGPGTHVKNANIYASIAGPVIIEQTQPSSKVKAIVSVS
RNLNTQPGLVAKPTPAPSTPAKTTAAKPKLRYNTLPAVDSIVLARVTRVQKRQATVSILV
VLDASSSAQIPDSSKTASDNDNIASILTSAANPENHSNSDELRFQALIRKEDVRAVEKDR
VVMDEMFRVGDIVRGTVISLGDQSFYYLTTARNDLGVVMARSEAGNMMFPVSWKEMRDPV
TGAAELRKVARPF
NT seq 762 nt   +upstreamnt  +downstreamnt
atggctagcacactgcccaagctcgctattccaggccagcaactaggttcaatcacttct
tactttgcaggtccaggtactcatgtgaagaatgccaatatttatgcatccattgctggg
ccggtgattattgaacagacccagccaagctcgaaagtaaaagctattgtcagtgtttcg
cggaacttgaacacacagccaggactcgtcgcgaaacctactcccgctccctccacaccg
gcaaagaccacagccgcgaagccaaagttgaggtacaatacattgcctgcagtcgactcg
attgtcctggcgcgcgttactcgtgtgcagaagcgccaggccacagtgtccattctggtc
gtgctagacgcatcgagcagtgcccagatcccggattcctcgaagacagcttccgacaac
gacaacatcgcctctatcctcacttcggccgcaaaccctgagaaccatagcaactcagac
gagctccgctttcaggcacttatccggaaggaggatgtgcgtgctgtcgagaaagaccgt
gtcgtcatggacgagatgttccgcgttggagatatcgtgcgtggcaccgtgatctccctg
ggcgatcagagcttttattacctcaccaccgcgcggaacgatctcggtgtcgtgatggcc
cgcagcgaagctggtaatatgatgttccctgtcagctggaaggagatgagagaccccgtc
actggcgcagcagaattgcgaaaggtggcccgtccgttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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