KEGG   Aspergillus clavatus: ACLA_068000
Entry
ACLA_068000       CDS       T01148                                 
Name
(RefSeq) replication factor A 1, rfa1
  KO
K07466  replication factor A1
Organism
act  Aspergillus clavatus
Pathway
act03030  DNA replication
act03420  Nucleotide excision repair
act03430  Mismatch repair
act03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:act00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ACLA_068000
   03420 Nucleotide excision repair
    ACLA_068000
   03430 Mismatch repair
    ACLA_068000
   03440 Homologous recombination
    ACLA_068000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:act03000]
    ACLA_068000
   03032 DNA replication proteins [BR:act03032]
    ACLA_068000
   03400 DNA repair and recombination proteins [BR:act03400]
    ACLA_068000
Transcription factors [BR:act03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    ACLA_068000
DNA replication proteins [BR:act03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    ACLA_068000
DNA repair and recombination proteins [BR:act03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     ACLA_068000
   MMR (mismatch excision repair)
     ACLA_068000
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     ACLA_068000
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N tRNA_anti-codon CDC24_OB3 DUF223
Other DBs
NCBI-GeneID: 4708132
NCBI-ProteinID: XP_001275199
UniProt: A1C5V2
AA seq 603 aa
MALDAASQVSVGALSAIFDERNPQVQEPIVQCVQIKPLPPQPNHPERYRAVFSDITNYVQ
TMLATQANHFVTSGMLKKGCFVRLKSFQANSVKGKKILIILDLEVLQELGEAEKIGEPKP
LENKSDVEEKPQPTTISSNGFYGSKIQPQRVESGVQPTRSPLASTHATIYPIEYISPFSN
KWTIKARCTSKSTIKTWHNRNSEGRLFSVNLLDDSGEIRATGFNEQCDMLYDVFQEGGVY
YISTPCRVQIAKKQFTNLNNDYEITFERGTVVEKAEDQSDVPQVRFNFTTVGDLQSVEKD
TTIDVVGVLKEVGEISQIVSKSTNKPYDKRELTLVDSSGFSVRLTVWGTTALNFSATPES
VIAFKGVKVSDFGGRSLSLLSSGSMTIDPDIEEAHRLKGWYDAQGRHETFSSHASMSSAS
SSAGKLDRFKTVAQIREEQLGMSDEAAYFSCRATVIYIKQDTICYPACLSQGCNKKVTEL
DPGQWRCESCDKTHLRPEYRYIMLINVSDHTGQLWLSCFDEVGRQLLGISADELMDMRQS
ESNLAGEVFQEANCRTWNFRCRAKLDHYGDQPRIRYQVSSAKAINYSEEASRLMNLIQSY
NLS
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggctttagatgctgcttcccaagtctcagttggggcactcagtgccatttttgacgaa
aggaatccgcaggttcaggaaccgatcgttcagtgtgtccagatcaagccattgcctccc
cagccgaaccatccagagcgctacagggctgtgtttagtgatatcacgaactatgttcaa
actatgctcgcaacccaagcaaatcactttgtgaccagtggcatgcttaaaaaggggtgt
tttgtccggttgaagtcatttcaagcaaactctgttaaagggaaaaagattctcatcatc
ttagatctcgaagttttgcaagaattaggtgaggcagagaagattggggaaccgaagcca
ctggaaaataaatcggacgtggaggagaagcctcaacccactacaatatctagcaatgga
ttttacggctctaagatccaaccgcaacgagtggaatctggagtacagcctacacgttct
ccgttggcttcaactcatgcgaccatatacccaatcgagtacatttcgcctttctcaaac
aagtggacgatcaaggcgcgatgcacaagcaaatcgaccatcaaaacttggcataatagg
aactcggaggggagactattcagcgttaacttacttgatgatagtggcgaaattcgggca
acaggcttcaatgaacagtgcgacatgttatacgacgttttccaggaaggcggtgtgtat
tacatatcaaccccttgcagggtccagatcgccaagaagcagtttaccaacttgaacaat
gactatgaaatcacatttgaaaggggcaccgttgttgaaaaggcagaggaccaaagtgat
gttcctcaagttcgtttcaatttcacaactgttggtgatctgcaatctgtggagaaagat
acgaccatcgacgttgttggtgtgctgaaagaggttggagagatttcccaaatcgtgtca
aaatcgaccaataaaccgtacgacaagcgcgagctcacactagtcgacagctcggggttc
tccgttcgattgactgtatggggtacgacggctctgaatttcagcgccactcctgagtcc
gttatcgcttttaaaggcgtgaaggtatctgattttggagggagaagcctgagtctttta
agctccgggtccatgacaattgatccagacatagaagaggcccatcgactcaaaggctgg
tatgacgctcaaggcagacatgagacattctcttcacatgcctcaatgtccagtgcgtca
tcgtccgcaggtaaattggaccgtttcaagacagttgcacaaatacgcgaggagcaacta
gggatgtctgatgaggcagcatatttctcgtgcagagcaactgtcatctacataaaacag
gataccatctgctatcccgcttgtctttcccaggggtgcaataaaaaggtcacagaactt
gatcccggacagtggcggtgtgaaagttgcgacaaaacccatctccgcccagagtatcgt
tacattatgctcatcaatgtcagcgatcacactggtcagctctggctcagctgctttgat
gaggttggaaggcaattgctaggtatatctgcggatgaattgatggacatgcgccaaagc
gagagcaaccttgctggtgaagttttccaggaagccaattgccgaacgtggaattttaga
tgtcgtgctaagcttgatcactatggagatcaaccacgcatccgttatcaggtgtcatcg
gcgaaagccatcaattattcggaagaggcgtctcgtcttatgaatctgatacaatcgtat
aacctctcttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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