KEGG   Aspergillus clavatus: ACLA_093550
Entry
ACLA_093550       CDS       T01148                                 
Name
(RefSeq) exosome complex subunit Rrp46, putative
  KO
K12590  exosome complex component RRP46
Organism
act  Aspergillus clavatus
Pathway
act03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:act00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACLA_093550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:act03019]
    ACLA_093550
Messenger RNA biogenesis [BR:act03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     ACLA_093550
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 4704862
NCBI-ProteinID: XP_001273082
UniProt: A1CFK7
AA seq 249 aa
MVGPAASLTPLARADGSASYQCPTTGYSILGSVNAPIELPGRRDALKPEEATVEVFVKPG
TTPGGVGERYVEGIIKSMLGRIILGREKGYPRRGVVVTLAIVGGQSVTRGDSYLTLLPAL
LQASLLALLSAAVPLSMTFTATVLAVTAAGDIVPEPSIEQAATAKSLHALAFSSKGHLLL
NESQGKFDFDTWDKVHERASAICHGTGISSGDGDVAMAGEDNGQNLEKFVRETVEDKLYS
DYAWKIDAA
NT seq 750 nt   +upstreamnt  +downstreamnt
atggttggaccagctgcttcgctcacacctctggcccgtgccgacgggtcggcatcctac
cagtgtcctacgaccggttacagtatcctgggctcggtgaatgctcctatcgagctacca
ggtcgccgtgatgctttgaaacccgaagaagcgactgtcgaggtctttgtgaagccgggg
acgacccccggcggtgttggcgaacgctacgtggagggcatcatcaagagcatgctagga
aggataattctgggtcgggagaagggataccctcgacgaggcgttgttgtcacactggct
attgtgggtggccaaagcgttaccagaggtgattcgtatctaactcttctaccggctctc
cttcaagcctcgcttctggcgctactctctgctgctgtacctttatctatgacttttaca
gcaactgttctggcggtcaccgcggccggagatatcgttccagagccatcgatcgaacaa
gcggcgacagccaaatcccttcatgcactggccttttcttccaagggtcatctcctgctg
aatgaaagccaaggaaagtttgattttgatacttgggataaggtgcatgagcgggcgtcc
gcgatctgtcacgggaccgggatcagtagcggcgacggtgacgttgccatggccggagag
gacaatggacagaacctggagaaattcgtacgagagacggtcgaggataaactttattca
gactacgcctggaagattgatgcggcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system