KEGG   Actinoalloteichus sp. AHMU CJ021: C1701_04550
Entry
C1701_04550       CDS       T05306                                 
Name
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
acta  Actinoalloteichus sp. AHMU CJ021
Pathway
acta03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:acta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    C1701_04550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acta03400]
    C1701_04550
Enzymes [BR:acta01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     C1701_04550
DNA repair and recombination proteins [BR:acta03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     C1701_04550
SSDB
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_OB_2
Other DBs
NCBI-ProteinID: AUS77753
Position
complement(1166557..1167990)
AA seq 477 aa
MADLDEYRRRRDPRRTPEPVPDHGPLPHGADDVFVVQEHHARRLHWDVRLERNGVLVSWA
VPKGLPAEPGTVRLAVRTEDHPLDYADFEGRIPKGEYGAGEVLIWDRGTYETRKWTDHEV
DVVLHGDRVTGRYVFFGRGGDWMVRRSDPPQDPDRVPVPDDVAPMLATAGTLPSTSEDDQ
WCYEFKWDGARALAEVEGGRLRLRNRRGEDVTATYPELRGLGEQLGSTQVLLDGEIVVLD
QGRPSFALLQRRLHVTGQARTRRLAEEHPATLLVFDLLHLDGRNLFDLPYTRRRALLDEL
APRGPHWQTPPSFSGGGAAVLQVSRERGFEGIVAKHRDSPYRPGRRSPAWTKIKDVRTQE
VVVGGWRPGEGRRSGVLGSLLLGLPGPDGLRFVGSVGSGFSEAELRSLTGTLRELASAKS
PFVGPVPAQRARSALWVEPRLVGEVLFQEWTRDGRLRAPRWRGLRDDKRPAEVTEGA
NT seq 1434 nt   +upstreamnt  +downstreamnt
atggccgacctggacgagtaccggcgtcggcgggacccgagacggacgcccgagcccgtc
cccgaccacggccccctcccgcacggcgcggacgacgtgttcgtcgtgcaggaacaccac
gcccgacgcctgcactgggatgtccggctcgaacggaacggggtgctcgtctcctgggcg
gtgcccaagggcttgcccgccgaacccggcaccgtccgactcgccgtgcgcaccgaggac
cacccgctcgactacgcggacttcgagggccgcatcccgaagggggagtacggggccggt
gaggtgctgatctgggacaggggcacctacgagacccggaagtggaccgaccacgaggtc
gacgtggtgctgcacggcgaccgggtgacggggcgctacgtcttcttcggtcgaggcggc
gactggatggtgcgacggagcgacccgccccaggaccccgaccgggtcccggtgcccgac
gacgtggcgccgatgctggccaccgccggcaccctgcccagcacctccgaggacgaccag
tggtgctacgagttcaagtgggacggcgcccgggccctcgccgaggtggagggcggtcgg
ctccggttgcgcaaccgtcgaggcgaggacgtcaccgccacctaccccgagctgcggggg
ctcggggagcagctcggctccacccaggtgctgctcgacggcgagatcgtcgtgctcgac
cagggacgcccgagtttcgcgctgctccaacgtcggctccacgtcaccgggcaggccagg
accaggcgcctcgccgaggaacaccccgccaccctcctcgtcttcgacctcctccacctc
gacggccggaacctcttcgacctgccctacacgcggcggcgggcgctgctcgacgagctc
gccccgcgcggaccccactggcagacacccccgtccttctccggagggggcgccgccgtc
ctccaggtgagcagggaacgggggttcgagggcatcgtcgccaagcaccgagactccccg
taccggccgggccggcgctcaccggcctggaccaagatcaaggacgtgcgcacccaggag
gtggtggtcggcggctggcgtccgggggagggccggcggagcggggtgctgggatcgctg
ttgctcggcctccccggccccgacgggctccgcttcgtcggatcggtcggcagcggcttc
tccgaagccgaactgaggagcctcaccggcacgctgcgcgagctggccagcgcgaagtcc
cccttcgtcggaccggtgccggcccagcgggcccggtccgccctctgggtcgaaccccgc
ctggtcggtgaggtgctgttccaggagtggacgcgggacgggcggctccgggccccccgc
tggcgcggactccgggacgacaaacggccagcggaggtgaccgagggtgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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