KEGG   Acidithiobacillus caldus SM-1: Atc_0567
Entry
Atc_0567          CDS       T01581                                 
Name
(GenBank) Signal recognition particle, subunit Ffh SRP54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
acu  Acidithiobacillus caldus SM-1
Pathway
acu02024  Quorum sensing
acu03060  Protein export
acu03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:acu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Atc_0567
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Atc_0567
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Atc_0567
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:acu02044]
    Atc_0567
Enzymes [BR:acu01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Atc_0567
Secretion system [BR:acu02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Atc_0567
  Eukaryotic Sec-SRP protein
   Atc_0567
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA Zeta_toxin ArsA_ATPase AAA_33 nSTAND3 AAA_24 AAA_25 AAA_31 cobW APS_kinase ATPase ABC_tran ResIII KTI12 NACHT AAA_16 YqeC AAA_18 ParA Thymidylate_kin SWI2_SNF2 AAA_28 SLFN-g3_helicase AAA_30
Other DBs
NCBI-ProteinID: AEK57217
UniProt: F9ZMA3
Position
577673..579049
AA seq 458 aa
MFDNLTQKLSQSFRNLRGQGRLSEDNIRDALRDVRMALLEADVALPVVKDFIQAVRERAL
GEEVTRSLTPGQVFIKIVHDELVALMGATNDRLDLQVRPPAVILLAGLQGSGKTTTAAKL
ALWLTEREKKRVLLVSTDVYRPAAMDQLRNLGRDIGVEVFPSDPSQAPLTIARDALAEAQ
RKVMDVLIVDTAGRLHVDEEMMREAKDLAAVVQPAELLFVVDAMTGQDAVNTAKAFDAAL
PLTGVILTKADGDARGGAALSIRAVTGKPIKFIGVGEKVRKGLEPFHPDRMASRILGMGD
IVSLVEQVQQDVGQEQAQRMTEKLRKGKGFDLEDFREQLRQLERMGGMASLMDKLPGMGE
LPAEAQSALADQKPMRRLEAIINSMTPQERRHPEIIKASRRRRIAAGSGTTVTEVNRLLK
QFEMMQKMFKKMGKGGKGLGRLLGMNPRNLLKGGLPFS
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgttcgacaatctcacccagaagctcagccaaagcttccgcaacctgcgtggtcagggg
cggctcagcgaggacaacatccgcgatgccctgcgcgacgtgcgcatggccttgctcgag
gccgacgtagccctgccggtggtcaaggacttcatccaggccgtgcgcgagcgggcgctg
ggtgaggaggtcacccgcagcctcacgccggggcaggtcttcatcaagatcgtccacgat
gaactggtggcgctcatgggtgccaccaacgatcgcctggatctgcaggtacggccaccg
gccgtcatcctcctggccggtctgcaaggttcgggcaagaccactacggcggcaaaactt
gccctgtggctgacggagcgggagaagaaacgggtcttgttggtcagcacggacgtctac
cgtccggcggccatggaccagctgcgcaatctgggccgcgacatcggcgtcgaggtcttt
cccagtgaccccagccaggctccgctcacgatcgcgcgggacgccctggccgaggcgcag
cgcaaggtcatggacgtgcttatcgtcgacaccgccggtcgtctccatgtggacgaggag
atgatgcgcgaggccaaggatctcgccgccgtcgtccagccggcggagctccttttcgtg
gtggatgccatgacgggacaggacgccgtcaacaccgccaaggccttcgacgccgccttg
ccgttgacgggggtcatcctcaccaaggcggacggagacgcgcgcggcggtgcggccctg
tccatccgcgccgtcaccggtaagcccatcaagttcatcggtgtgggcgaaaaggtgcgc
aagggtctggagcctttccatcccgatcgcatggcgtcccgcattctcggcatgggcgat
atcgtcagcctggtggagcaggtgcagcaggacgtcggccaggagcaggcccagcgcatg
acggaaaagctgcgcaagggcaagggcttcgacctggaggattttcgggagcagctgcgt
caactggagcgcatgggtggcatggccagtctgatggacaagcttccgggcatgggtgaa
ctgccggccgaggcgcagagcgccctcgccgaccagaaacccatgcgccggctggaggcc
atcatcaactccatgacgccgcaggagcgccgtcaccccgagatcatcaaggcctcgcgc
cgccgccgcattgccgccggctccggcaccacggtgaccgaggtcaaccgtctcctcaag
cagttcgagatgatgcagaagatgttcaagaagatgggtaaaggcggcaagggcttgggg
cgtcttctgggtatgaatccccggaaccttttgaaaggtggtctgcccttttcttga

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